Dr Rafal Klajn’s UK tour as the 2018 Cram Lehn Pedersen Prize winner

We are delighted to announce that Dr Rafal Klajn, winner of the ChemComm sponsored 2018 Cram Lehn Pedersen Prize, will be giving a series of lectures at UK universities during the week commencing 16th July 2018.

Rafal began his independent research career in November 2009 at the Weizmann Insitute of Science, Israel, directly after obtaining his PhD degree. His group has worked on nanoscale reactivity and self-assembly – incorporating photo-responsive moieties into nanoporous solids, working with superparamagnetic nanoparticles of various shapes and demonstrating that cubic nanoparticles of iron oxide could spontaneously assemble into helical materials, and developing the concept of “dynamically self-assembling nanoflasks” capable of accelerating chemical reactions using light, working with flexible metal-organic (coordination) cages that can encapsulate diverse organic molecules ranging from fluorescent dyes to nonpolar pharmaceuticals, among other projects.

He is currently an Associate Professor at Department of Organic Chemistry at the Weizmann Institute of Science and now focuses on creating synthetic out-of-equilibrium systems and “life-like” materials, not only to develop innovative functional materials, but also to tackle what he deems as one of the most important and fascinating problems – the origin of life.

As part of the Prize, Rafal presents 3 lectures and we are delighted to announce that 2 of these will be taking place during his UK tour. He will be giving these in conjunction with lectures for the 2017 Chem Soc Rev Emerging Investigator Lectureship that was also awarded to him. You can find details for his upcoming UK tour below.

Day University Host
Monday 16th July University of Bristol Professor Jonathan Reid
Tuesday 17th July Durham University Professor Jonathan Steed
Wednesday 18th July University of Nottingham Professor David Amabilino
Thursday 19th July University of Cambridge Professor Jonathan Nitschke
Friday 20th July University College London (UCL) Dr Tung Chun Lee
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An enzymatic Rube Goldberg machine: a bioluminescent switch for the detection of uracil DNA-glycosylase

A team of researchers from Shandong Normal University in Jinan, China, have developed a highly sensitive and label-free assay for the detection of uracil-DNA glycosylase, a DNA repair enzyme that removes uracil from DNA molecules. Uracil is an RNA base, and when uracil appears in DNA through deamination of cytosine or misincorporation during DNA synthesis, the error can have mutagenic consequences.

Diminished activity of uracil-DNA glycosylase has been linked to a number of disease states including human immunodeficiency and Bloom syndrome, an inherited disorder associated with an increased risk of cancer (among other symptoms). Developing sensitive methods to quantify uracil-DNA glycosylase would enable early diagnosis of such conditions and improve understanding of the DNA-repair machinery. As a proof-of-concept, the researchers showed that this method could quantify the enzyme in the cell lysate of HeLa cancer cells.

Their method reminds me of Rube Goldberg machines, which achieve a task via a series of connected, mechanical steps. Completion of one step triggers the start of another: such as a line of falling dominos hitting a marble that, in turn, rolls down a track. In this work the action of one enzyme returns a product that is the preferred substrate of another enzyme. At the risk of deviating slightly, one of the more spectacular examples of a Rube Goldberg machine is seen in the music video for OK GO’s ‘this too shall pass’, a single-take shoot of a warehouse sized machine, featuring rolling cars, swinging pianos, flowing water and rolling billiard balls, all to perform the task of (spoiler alert) blasting the band members in the face with coloured paint.

The label-free strategy for detecting uracil-DNA glycosylase results in a bioluminescent signal via tricyclic signal amplification

The strategy starts with the action of uracil-DNA glycosylase and ends with a bioluminescent signal via a cascade of enzymatic reactions

The authors’ strategy involves a series of sequential steps employing seven different enzymes and three nucleic acid probes. It begins with a double stranded DNA probe containing one rogue uracil base: the perfect bait for uracil-DNA glycosylase. The action of this enzyme and two others, in a process involving base excision, DNA backbone cleavage and the addition of thymine-rich sequences, produces a large quantity of single-stranded DNA molecules with long thymine-rich tails. These molecules hybridise with adenine-rich RNA probes to generate RNA-DNA duplexes. An enzyme digests the RNA portion, releasing adenosine monophosphate monomers, which are converted to adenosine triphosphate (ATP), a required energy input to activate firefly luciferase. Luciferase catalyses the oxidation of luciferin to form oxyluciferin, accompanied by a large bioluminescent signal. Thus, uracil-DNA glycosylase is detected with 1-2 orders of magnitude more sensitivity than state-of-the-art fluorescent and luminescent assays.

Unlike conventional Rube Goldberg machines, which are characterised by unnecessary complexity, in this ‘enzymatic Rube Goldberg machine’ each step has a specific purpose and serves to amplify the signal of the last. This is dubbed ‘tricyclic cascade signal amplification’ and it enables highly sensitive detection of the enzyme.

To find out more please read:

Label-free and high-throughput bioluminescence detection of uracil-DNA glycosylase in cancer cells through tricyclic cascade signal amplification

Yan Zhang, Qing-nan Li, Chen-chen Li, Chen-yang Zhang.
Chem. Commun., 2018, 54, 6991-6994
DOI: 10.1039/c8cc03769h

About the author

Zoë Hearne is a PhD candidate in chemistry at McGill University in Montréal, Canada, under the supervision of Professor Chao-Jun Li. She hails from Canberra, Australia, where she completed her undergraduate degree. Her current research focuses on transition metal catalysis to effect novel transformations, and out of the lab she is an enthusiastic chemistry tutor and science communicator.

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HOT ChemComm articles for June

All of the referee-recommended articles below are free to access until 3rd August 2018.

Highly Lewis acidic cationic alkaline earth metal complexes 
Jürgen Pahl, Steffen Brand, Holger Elsen and Sjoerd Harder
Chem. Commun., 2018, Advance Article
DOI: 10.1039/C8CC04083D, Communication

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Single-site labeling of lysine in proteins through a metal-free multicomponent approach
Maheshwerreddy Chilamari, Neetu Kalra, Sanjeev Shukla and Vishal Rai
Chem. Commun., 2018,54, 7302-7305
DOI: 10.1039/C8CC03311K, Communication

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Controlling the growth of fullerene C60 cones under continuous flow
Ibrahim K. Alsulami, Thaar M. D. Alharbi, David P. Harvey, Christopher T. Gibson and Colin L. Raston
Chem. Commun., 2018, Advance Article
DOI: 10.1039/C8CC03730B, Communication

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Formal water oxidation turnover frequencies from MIL-101(Cr) anchored Ru(bda) depend on oxidant concentration
Asamanjoy Bhunia, Ben A. Johnson, Joanna Czapla-Masztafiak, Jacinto Sá and Sascha Ott
Chem. Commun., 2018, Advance Article
DOI: 10.1039/C8CC02300J, Communication

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Smart urea ionic co-crystals with enhanced urease inhibition activity for improved nitrogen cycle management
Lucia Casali, Luca Mazzei, Oleksii Shemchuk, Kenneth Honer, Fabrizia Grepioni, Stefano Ciurli, Dario Braga and Jonas Baltrusaitis
Chem. Commun., 2018,54, 7637-7640
DOI: 10.1039/C8CC03777A, Communication

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CO2-Triggered microreactions in liquid marbles
Xinjie Luo, Hongyao Yin, Xian’e Li, Xin Su and Yujun Feng
Chem. Commun., 2018, Advance Article
DOI: 10.1039/C8CC01786G, Communication

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Meeting of Inorganic Chemists Recently Appointed

Chemical CommunicationsChemical Science and Dalton Transactions are pleased to sponsor the 2018 Meeting of Inorganic Chemists Recently Appointed (MICRA). This biennial event is being organised by Dr Timothy Easun and Dr Rebecca Melen from Cardiff University, and is taking place on 10 – 12 September 2018 at Cardiff University in Wales.

The meeting brings together junior inorganic chemistry academics from across the UK to help aid their development into independent researchers through networking and exchanging experiences. MICRA 2018 will have exciting talks from experts such as Paul Saines (University of Kent), Timothy Easun (Cardiff University) and Rebecca Melen (Cardiff University).

For more information and to register, go to: https://www.micra2018.com/

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ChemComm poster prize winner at the 16th Symposium for Host-Guest and Supramolecular Chemistry

The 16th Symposium for Host-Guest and Supramolecular Chemistry was held on 2 – 3 June 2018 at the Tokyo University of Science in Japan.

This annual symposium covers all aspects of the chemical sciences related to molecular recognition and supramolecular chemistry, including the discussion of topics around intermolecular interactions. The event included a special lecture by Dr Shigeki Sasaki and invited lectures by Dr Takashi Hayashi and Dr Katsuhiko Ariga.

ChemComm is delighted to announce that the ChemComm poster prize was awarded to Hiroshi Koganezawa from the Tokyo University of Science for a poster entitled ‘Synthesis of [2]Rotaxanes with Spirofluorene and Pyrrole Moieties’.

Well done Hiroshi from everyone at ChemComm!

 

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Better Make It A Double

Synthesizing nanomaterials consisting of two-particle pairs, or dimers, is no longer a headache. Hongyu Chen and coworkers from Nanjing Tech University, China recently developed a protocol that can produce gold dimers with a record high yield. This breakthrough is published in Chem. Commun.

Dimers are suitable platforms to study the effects of particle-particle interactions on the electrical and optical properties of the constituent materials. Unfortunately, no conventional synthesis methods to exclusively produce dimers from single particles have been successful. This is because of the uncontrollable particle-aggregation rate that leads to the formation of multi-particle clusters. Therefore, how to couple single particles into dimers without triggering their further aggregation has become a tough nut to crack.

Chen and coworkers found a solution by developing a polymer-assisted method that generates gold dimers with high yield. Firstly, they encapsulated individual gold nanoparticles with polymer shells made of polystyrene-b-poly(acrylic acid). Under optimized conditions, the gold nanoparticles were mostly coupled into dimers (Figure 1), achieving a dimer yield of 65%. This is the highest dimer yield achieved for one-step synthesis methods.

Figure 1. (a) A transmission electron microscopy (TEM) image of the polymer-encapsulated gold single particles. (b) A TEM image and (c) a scanning electron microscopy image of the synthesized gold dimers. All scale bars are 200 nm.

The key to this success is due to three factors: temperature, solvent composition and acid concentration. All these factors can change the strength of the repulsion force among the polymer shells. The force must be meticulously tuned to a level that is weak enough to induce 1-to-1 coupling, but strong enough to prevent 1-to-multiple or multiple-to-multiple aggregation. Through a set of control experiments, the authors identified the optimal conditions to be 60 oC, dimethylformamide/water (v/v)=6:1 and 5 mM of hydrochloric acid.

The method demonstrated herein could be extended to other particles. It may also inspire versatile synthesis strategies towards complex nanostructures with high selectivity.

 

To find out more please read:

Controllable Oligomerization: Defying Step-Growth Kinetics in the Polymerization of Gold Nanoparticles

Xuejun Cheng, Gui Zhao, Yan Lu, Miao Yan, Hong Wang and Hongyu Chen

Chem. Sci., 2018, DOI: 10.1039/C8CC03424A

 

About the blogger:

Tianyu Liu obtained his Ph.D. (2017) in Physical Chemistry from University of California, Santa Cruz in the United States. He is passionate about scientific communication to introduce cutting-edge research to both the general public and scientists with diverse research expertise. He is a blog writer for Chem. Commun. and Chem. Sci. More information about him can be found at http://liutianyuresearch.weebly.com/.

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ChemComm poster prize winner at the 2018 European Materials Research Society Spring Meeting

The 2018 European Materials Research Society (EMRS) Spring Meeting was held from the 18th – 22nd June in the Strasbourg Convention Centre in France.

The EMRS Spring Meeting is the society’s major conference and covers all aspects of materials science including energy and environment, biomaterials, semiconductors, nanomaterials, functional materials, and materials processing and characterization. It offers on average 25 topical symposia and is widely recognised as being of the highest international significance, with approximately 2,500 attendees every year.

ChemComm is proud to announce that the ChemComm poster prize was awarded to Dr Manal Alkhamisi from the University of Nottingham (School of Physics and Astronomy) for ‘The Growth and Fluorescence of Phthalocyanine Monolayers and Thin Films on Hexagonal Boron Nitride’. Manal was awarded the prize by ChemComm Associate Editor Steven De Feyter.

Well done Manal!

 

ChemComm Associate Editor Steven De Feyter (left) awarding the poster prize to Dr Manal Alkhamisi (right)

 

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HOT ChemComm articles for May

All of the referee-recommended articles below are free to access until 6th July 2018.

A quasi-solid-state and self-powered biosupercapacitor based on flexible nanoporous gold electrodes
Xinxin Xiao and Edmond Magner
Chem. Commun., 2018, 54, 5823-5826
DOI: 10.1039/C8CC02555J, Communication

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Late stage modifications of P-containing ligands using transition-metal-catalysed C–H bond functionalisation
Zhuan Zhang, Pierre H. Dixneuf and Jean-François Soulé
Chem. Commun., 2018, Advance Article
DOI: 10.1039/C8CC02821D, Feature Article

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A novel three-fluorophore system as a ratiometric sensor for multiple protease detection
Yana Okorochenkova, Martin Porubský, Sandra Benická and Jan Hlaváč
Chem. Commun., 2018, Advance Article
DOI: 10.1039/C8CC01731J, Communication

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The environmental-sensitivity of a fluorescent ZTRS–Cd(II) complex was applied to discriminate different types of surfactants and determine their CMC values
Fei Deng, Shuangshuang Long, Qinglong Qiao and Zhaochao Xu
Chem. Commun., 2018, Advance Article
DOI: 10.1039/C8CC03888K, Communication

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An intrinsically compressible and stretchable all-in-one configured supercapacitor
Mengmeng Hu, Jiaqi Wang, Jie Liu, Jiaheng Zhang, Xing Ma and Yan Huang
Chem. Commun., 2018, Advance Article
DOI: 10.1039/C8CC03375G, Communication

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Paraffinic metal–organic polyhedrons: solution-processable porous modules exhibiting three-dimensional molecular order
Kenichiro Omoto, Nobuhiko Hosono, Mika Gochomori and Susumu Kitagawa
Chem. Commun., 2018, Advance Article
DOI: 10.1039/C8CC03705A, Communication

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Come for the colour changing crystals, stay for the science

Synthesis of copper bimetallic complexes from imidazolyl ligands, and the solvatochromic materials formed upon crystallization and solvent guest-exchange. The solvatochromic behaviour was quantified with visible-region diffuse reflectance spectra.

Synthesis of copper bimetallic complexes from imidazolyl ligands, and the solvatochromic materials formed upon crystallization and solvent guest-exchange. The solvatochromic behaviour was quantified with visible-region diffuse reflectance spectra.

During the first inorganic chemistry course I took during my undergraduate degree, our professor started the class by passing around some mineral samples, promising us that if we pursued the chemistry of metals we could work with beautifully coloured crystals every day. At the time, colour seemed like such a trite detail amongst the complexity of the subject. Why would you choose a field of study based on something so simple? Well, after a PhD dominated by pale yellow oils, I think I get it now.

Nikolayenko and Barbour at the University of Stellenbosch in South Africa bring us colour! The authors synthesised organometallic copper complexes, which crystallise to form porous single crystals that drastically change colour upon absorption of various solvents. The authors investigated the solvatochromic mechanism using X-ray crystallography, EPR, UV-visible spectroscopy and DFT calculations. Solvatochromic materials are not just made to look pretty; they have potential to be used as sensitive, selective and recyclable sensors to detect solvent vapours with useful applications in industrial process risk management, chemical threat detection and environmental monitoring.

The researchers synthesised a series of complexes comprised of a bidentate ligand with 2-methylimidazolyl groups coordinated to copper(II) ions. The complexes stack to form channels in the crystal, capable of trapping solvent molecules to give different coloured crystals: DMSO and THF-containing crystals are green (λmax = 574 nm and 540 nm, respectively), those containing acetonitrile are red (λmax = 624 nm), and crystals trapping acetone, ether and pentane are yellow (λmax = 588), orange (λmax = 598 nm) and red/brown (λmax = 592 nm), respectively.

The authors revealed a correlation between the size of the solvent guest, coordination geometry of the copper complex, and the ligand field splitting. Small guests such as acetonitrile minimally perturb the metallocyclic framework, preserving a rhombic ligand field geometry (large δxy of g values in the EPR spectrum), small ligand d-orbital splitting and red-shifted optical spectra. Large guests such as THF have the opposite effect, giving ligand field geometries approaching tetragonal (small δxy), large ligand field d-orbital splitting and blue-shifted optical spectra.

By delving into the complexity beneath a seemingly simple phenomenon, Nikolayenko, Barbour and their co-workers have shown using a series of single-crystal complexes that there is nothing simple about colour (and nothing trite about detail).

To find out more please read:

Supramolecular solvatochromism: mechanistic insight from crystallography, spectroscopy, and theory

Varvara I. Nikolayenko, Lisa M. van Wyk, Orde Q. Munro, Leonard J. Barbour.
Chem. Commun., 2018, Advance Article
DOI: 10.1039/c8cc02197j

About the author

Zoë Hearne is a PhD candidate in chemistry at McGill University in Montréal, Canada, under the supervision of Professor Chao-Jun Li. She hails from Canberra, Australia, where she completed her undergraduate degree. Her current research focuses on transition metal catalysis to effect novel transformations, and out of the lab she is an enthusiastic chemistry tutor and science communicator.

 

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Pt3Ni-Coated Palladium Nano-branches Outperformed Pt in Catalyzing Ethanol Oxidation

Researchers in China recently developed a new Pd-based catalyst that outperformed Pt, the benchmark catalyst for electrochemical oxidation of ethanol. This catalyst, synthesized by a one-pot chemical reduction method, consists of branched Pd nanocrystals coated with thin Pt3Ni shells.

The ethanol oxidation reaction (EOR) is a typical anode reaction that drives the energy output from fuel cells. Due to its intrinsically slow kinetics, the reaction requires proper EOR catalysts to facilitate the oxidation. Pt-based materials are highly active in promoting EOR, but the scarcity of Pt leads to high costs and demands efficient methods to recycle these materials. In addition, the instable catalytic activity of Pt significantly reduces the lifetime of EOR catalysts containing Pt. Clearly, developing inexpensive EOR catalysts with comparable performance to Pt is meaningful for the affordability and durability of fuel cells.

A research team led by Shuifen Xie at Huaqiao University and Shenzhen Research Institute of Xiamen University in China, have demonstrated a one-pot chemical reduction method of a novel EOR catalyst. This catalyst is made of Pt3Ni-coated Pd nanocrystals as shown in Figure 1. There are three main advantages for this catalyst over the benchmark Pt: Firstly, the core material Pd is more affordable. Secondly, the ultrathin Pt-alloy coating, Pt3Ni, contains relatively less Pt and is reported to exhibit high EOR catalytic activity. Thirdly, the little lattice mismatch between Pt and Pd allows seamless integration of the two metals that is beneficial to preserve the structural integrity and ensure excellent durability.

Figure 1. (a) The schematic illustration showing the key steps of the one-pot chemical reduction method. The catalyst is formed via consecutive reduction of Pd2+, Pt2+ and Ni2+ to Pd nano-branches, Pt nanoparticles and Pt3Ni coatings, respectively. (b) A TEM image of a representative morphology of a branched nanocrystal. (c) Elemental mappings depict that Pt and Ni elements exist mainly in the shell while Pd is in the core.

Electrochemical characterizations revealed that the catalytic performance of the Pt3Ni-coated Pd nanocrystals outperformed those of two commercial catalysts: Pt/C (Pt particles supported on activated carbon) and Pd black (a fine powder elemental Pd). Figure 2a compares the linear-sweep voltammograms of the three samples. The synthesized catalyst showed appreciably enhanced oxidation current at potentials beyond 0.4 V vs. RHE. The histograms in Figure 2b clearly display that the mass activity and the specific activity of the synthesized nanocrystals are the highest. The authors ascribed the superior performance to the high surface area (42.50 m2 g-1), the ultrathin Pt3Ni coating with its {111} crystal planes exposed, and the core-shell configuration.

Figure 2. (a) Linear-sweep voltammograms of the synthesized catalyst (Pd@Pt3Ni/C), Pt/C and Pd black. (b) The comparison of mass activity (i.e. oxidation current normalized to the masses of the catalysts) and specific activity (i.e. oxidation current normalized to the areas of the catalysts) of Pd@Pt3Ni/C, Pt/C and Pd black.

This work signifies the feasibility of Pd-based nano-catalysts as alternatives to Pt towards catalyzing EOR. It is also expected to encourage the effort in developing a diverse array of inexpensive and high-performance catalysts for other reactions pertaining to fuel cells, including but not limited to oxidation of fuels other than ethanol and oxygen reduction reactions.

To find out more please read:

One-Pot Synthesis of Pd@Pt3Ni Core-Shell Nanobranches with Ultrathin Pt3Ni{111} Skins for Efficient Ethanol Electrooxidation

Yuanyuan Wang, Wei Wang, Fei Xue, Yong Cheng, Kai Liu, Qiaobao Zhang, Maochang Liu and Shuifen Xie

Chem. Commun., 2018, DOI: 10.1039/c8cc02816h

About the blogger:

Tianyu Liu obtained his Ph.D. (2017) in Physical Chemistry from University of California, Santa Cruz in the United States. He is passionate about scientific communication to introduce cutting-edge research to both the general public and scientists with diverse research expertise. He is a blog writer for Chem. Commun. and Chem. Sci. More information about him can be found at http://liutianyuresearch.weebly.com/.

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