Mutant Enzymes and Frankenstein Catalysts

I know what you’re thinking: “Autumn is here! Who needs sunny weather and optimism? Sign me up for grey skies and vitamin D supplements!”. Oh you weren’t thinking that? Me neither. Well perhaps Halloween gives you more joy, along with the chance to see one of your colleagues dressed up like Freddy Mercury (‘Hg’ emblazoned on their chest, classic) at the departmental party?

In the spirit of Halloween, Simone Morra and Anca Pordea at the University of Nottingham have synthesized a mutant alcohol dehydrogenase enzyme turned Frankenstein catalyst, by replacing the zinc catalytic site with a covalently-bound rhodium(III) complex. The resulting mutant/transition-metal composite was used in combination with the wild-type enzyme to synthesize the chiral alcohol (S)-4-phenyl-2-butanol.

Like many hybrid systems, the purpose of combining enzymatic with transition metal catalysis is to take advantage of the benefits of each. Millions of years of evolution have produced enzymatic catalysts that function under mild conditions, in aqueous solvents, with impressive selectivity and high catalytic efficiency. But the narrow range of conditions that enzymes operate under can be disadvantageous in a synthetic setting. On the other hand, transition metal catalysts are versatile and can be easily customised, reacting with a liberty that would make the most promiscuous of enzymes blush.

Unfortunately, developing multi-component systems that utilise both transition metal and enzymatic catalysis is not as simple as combining them in a single mixture, as mutual deactivation often results. The authors found that encasing the transition metal complex in an enzyme provided a physical shield against inhibition, and preserved the activity of both the wild type enzyme and the rhodium(III) complex.

Synthesis of chiral alcohols via two interconnected cycles: the wild type enzyme (native ADH) reduces the ketone to the alcohol using NADPH as a reducing agent. NADPH is regenerated using the mutant enzyme containing a rhodium active site (chemically modified ADH) with formic acid as the terminal reductant. Alcohol dehydrogenase

Synthesis of chiral alcohols via two interconnected cycles: the wild type enzyme (native ADH) reduces the ketone using NADPH as a reducing agent. NADPH is regenerated by the mutant enzyme containing a catalytically-active rhodium complex (chemically modified ADH) with formic acid as the terminal reductant.

Two interconnected catalytic cycles were responsible for synthesis of the chiral alcohol. In the first, the wild type enzyme effected reduction of 4-phenyl-2-butanol, a process that relies on the biological reductant nicotinamide adenine dinucleotide phosphate (NADPH). In the second cycle, NADPH was recycled using the composite rhodium(III) complex/mutant enzyme, with formic acid as the stoichiometric reductant. The rate of alcohol formation was slow (turnover frequency of 0.02 s-1) and the transition-metal catalysed process was deemed to be rate limiting (compare to turnover frequencies of 4.8 s-1 for enzymatic systems). However, near perfect enantioselectivity was obtained (>99% ee).

This research demonstrates one way that transition metal catalysts can augment the scope of co-factor-dependent enzymes. Furthermore, devising strategies to prepare metal-complex/enzyme bioconjugates might have value for small molecule synthesis due to the second coordination sphere that enzymes offer; an encased steric environment to guide the reaction outcome is a valuable approach to improving selectivity in catalytic reactions.

To find out more please read:

Biocatalyst-artifical metalloenzyme cascade based on alcohol dehydrogenase

Simone Morra, Anca Pordea.
Chem. Sci., 2018, 9, 7447-7454
DOI: 10.1039/c8sc02371a

About the author

Zoë Hearne is a PhD candidate in chemistry at McGill University in Montréal, Canada, under the supervision of Professor Chao-Jun Li. She hails from Canberra, Australia, where she completed her undergraduate degree. Her current research focuses on transition metal catalysis to effect novel transformations, and out of the lab she is an enthusiastic chemistry tutor and science communicator.

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HOT Chemical Science articles for September

We are happy to present a selection of our HOT articles over the past month. To see all of our HOT referee-recommended articles from 2018, please find the collection here.

As always, Chemical Science articles are free to access.

Selective and catalytic carbon dioxide and heteroallene activation mediated by cerium N-heterocyclic carbene complexes
Polly Louise Arnold, Ryan Kerr, Catherine Weetman, Scott Doherty, Julia Rieb, Kai Wang, Christian Jandl, Max McMullon, Alexander Pöthig, Fritz Elmar Kühn and Andrew D Smith
Chem. Sci., 2018, Accepted Manuscript
DOI: 10.1039/C8SC03312A, Edge Article

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Ratiometric fluorescent probes for capturing endogenous hypochlorous acid in the lungs of mice
Xinfu Zhang, Weiyu Zhao, Bin Li, Wenqing Li, Chengxiang Zhang, Xucheng Hou, Justin Jiang and Yizhou Dong
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC03226B, Edge Article

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Surprising solvent-induced structural rearrangements in large [N⋯I+⋯N] halogen-bonded supramolecular capsules: an ion mobility-mass spectrometry study
Ulrike Warzok, Mateusz Marianski, Waldemar Hoffmann, Lotta Turunen, Kari Rissanen, Kevin Pagel and Christoph A. Schalley
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC03040E, Edge Article

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Advanced microRNA-based cancer diagnostics using amplified time-gated FRET
Xue Qiu, Jingyue Xu, Jiajia Guo, Akram Yahia-Ammar, Nikiforos-Ioannis Kapetanakis, Isabelle Duroux-Richard, Julia J. Unterluggauer, Nicole Golob-Schwarzl, Christophe Regeard, Catherine Uzan, Sébastien Gouy, Michael DuBow, Johannes Haybaeck, Florence Apparailly, Pierre Busson and Niko Hildebrandt
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC03121E, Edge Article

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Atomic structure of boron resolved using machine learning and global sampling
Si-Da Huang, Cheng Shang, Pei-Lin Kang and Zhi-Pan Liu
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC03427C, Edge Article

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Spontaneous growth of 2D coordination polymers on functionalized ferromagnetic surfaces 
Michele Mattera, Víctor Rubio-Giménez, Sophie Delprat, Richard Mattana, Pierre Seneor, Sergio Tatay, Alicia Forment-Aliaga and Eugenio Coronado
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC03067G, Edge Article

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4th International Conference on Energy and Biological Materials

The University of Science and Technology of China (USTC) in Hefei, China hosted the 4th International Conference on Energy and Biological Materials last month, September 16-18. The meeting was organised by Yi Cui (Stanford University, USA), Shuhong Yu, Jinlong Yang and Xinhe Bao (USTC) and also commemorated USTC’s 60th anniversary. The invited talks covered a wide range of topics, including materials for energy storage and conversion, catalysis and medicine, and bio-inspired materials. Chemical Science Deputy Editor Jeremy Allen, shown below, was also in attendance and talked to the delegates about ‘How to Publish’, speaking about the role of a publisher and giving a few tips about how to help get your papers noticed!

Left: Chemical Science Deputy Editor Jeremy Allen. Right: Delegates of the 4th International Conference on Energy and Biological Materials

 

The Royal Society of Chemistry was proud to support the meeting, offering 5 poster prizes. The winners of the prizes were:

  • Qiaofeng Yao (National University of Singapore) for ‘Toward total synthesis of functional metal materials’
  • Chengbin Jin (Zhejiang University of Technology) for ‘Green biomass for Li metal batteries’
  • Wen Luo (Wuhan University of Science and Technology) for ‘Encapsulating segment-like antimony nanorod in hollow carbon nanotube as a high-performance anode for rechargeable K-ion battery’
  • Hongliang Li (University of Science and Technology of China) for ‘Strong metal-support interaction in single-atom catalysts’
  • Xiuqiang Li (Nanjing University) for ‘Enhancement of interfacial solar vapor generation by environmental energy’

From Left to Right: Qiaofeng Yao, Chengbin Jin, Wen Luo, Hongliang, Li, Xiuqiang Li, Jeremy Allen

 

Well done to all of the prize winners from everyone at Chemical Science!

 

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UK-India Symposium on Advances in Organic Chemistry

The fourth RSC-CRSI (Royal Society of Chemistry – Chemical Research Society of India) meeting in the UK was on Advances in Inorganic Chemistry, held in Manchester on 26th September, and Advances in Organic Chemistry, held in Oxford on 28th September. Chemical Science Assistant Editor, Sarah Whitbread, attended the event at Jesus College, Oxford.

The symposium brought together Indian and UK researchers to share their knowledge and facilitate discussions regarding future UK-India collaborations. The event was very successful with interesting talks from both UK and Indian researchers. After the talks and posters there was an insightful discussion on potential areas of collaboration in Chemical Sciences and interdisciplinary between India and the UK with a panel of top scientists in UK and India, including Royal Society of Chemistry President, Professor Carol Robinson.

Daniele Antermite from Imperial College London was awarded the Chemical Science poster prize for his work on the C(sp3)–H Arylation of Pyrrolidines and Piperidines with C(3) Directing Groups. Congratulations Daniele!

UK-India Symposium on Advances in Organic Chemistry Chemical Science Poster Prize Winner

From left to right: Daniele Antermite, Imperial College London; Sarah Whitbread, Royal Society of Chemistry; Ed Anderson, University of Oxford

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TPCB Symposium poster prize winner

The 14th Annual Tri-Institutional Chemical Biology Symposium took place on 11th September at The Rockefeller University in New York. The Symposium was a great success and we look forward to supporting it again next year.

The winner of the Chemical Science poster prize was Chen Chen, pictured below.  Congratulations to Chen!

You can keep up to date with the plans for 2019 by following the TPCB website here.

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Nanotechnology for Energy and the Environment Symposium 2018

The RSC Chemical Nanoscience & Nanotechnology Group Annual Symposium 2018 was held at Burlington House, London on 6th-7th September. The Royal Society of Chemistry were delighted to support this event, which featured an excellent line up of speakers.

Congratulations to:

Qian Guo (Queen Mary University of London) on winning the Chemical Science poster prize

Amira Alazmi (KAUST) on winning the Nanoscale poster prize

Christopher Windle (University College London) on winning the Nanoscale Horizons poster prize

The Chemical Nanoscience & Nanotechnology Group also offered an award for the best early career researcher talk. Congratulations to Jijia Xie (University College London) on winning this prize.

Qian Guo receiving the Chemical Science poster prize Amira Alazmi receiving the Nanoscale poster prize
Christopher Windle receiving the Nanoscale Horizons poster prize Jijia Xie receiving the CNN group talk prize

Well done to all of the prize winners from everyone at Chemical Science!

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EuroBIC 14

This August saw the occasion of the 14th European Biological Inorganic Chemistry Conference (EuroBIC), held at the University of Birmingham in the UK. With an excellent line up of internationally renowned plenary and keynote speakers the event was a huge success, attracting around 400 attendees.

The Royal Society of Chemistry was pleased to support the event, offering poster prizes of books and book vouchers. The winners of RSC vouchers were:

  • Raul Berrocal-Martin (University of Glasgow) – Dalton Transactions Poster Prize
  • Wilma Neumann (Massachusetts Institute of Technology) – Metallomics Poster Prize
  • Ying Zhou (University of Hong Kong) – ChemComm Poster Prize
  • Leon Jenner (University of East Anglia) – Chemical Science Poster Prize

The following presenters also won the RSC Highly Commended Poster Awards:

  • Gloria Vigueras Bautista (University of Murcia)
  • Nicolai Burzlaff (Friedrich-Alexander University)
  • Samya Banerjee (University of Warwick)
  • Riccardo Bonsignore (Cardiff University)
  • Philip Ash (University of Oxford)

Dalton Transactions associate editor Nils Metzler-Nolte (Ruhr-Universität Bochum) and Chemical Science assistant editor William King were on hand to award the prizes.

Raul Berrocal-Martin (left) receiving the Dalton Transactions prize from Nils Metzler-Nolte (right) Ying Zhou (left) receiving the ChemComm prize from Nils Metzler-Nolte (right)
Leon Jenner (left) receiving the Chemical Science prize from William King (right) Gloria Vigueras Bautista (left) receiving a Highly Commended Poster Prize from William King (right)
Riccardo Bonsignore (left) receiving a Highly Commended Poster Prize from William King (right) Philip Ash (left) receiving a Highly Commended Poster Prize from William King (right)

The RSC offers a hearty congratulations to all poster prize winners!

Next year the 19th International Conference on Biological Inorganic Chemistry (ICBIC 19) will be held in Interlaken, Switzerland – August 11th to 16th. The next European Biological Inorganic Chemistry Conference (EuroBIC 15) will be held in Reykjavik, Iceland, in August 2020. 

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HOT Chemical Science articles for August

We are happy to present a selection of our HOT articles over the past month. To see all of our HOT referee-recommended articles from 2018, please find the collection here.

As always, Chemical Science articles are free to access.

Conformational selectivity and high-affinity binding in the complexation of N-phenyl amides in water by a phenyl extended calix[4]pyrrole
L. Escobar, A. Díaz-Moscoso and P. Ballester
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC03034K, Edge Article

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ZrMOF nanoparticles as quenchers to conjugate DNA aptamers for target-induced bioimaging and photodynamic therapy
Yuan Liu, Weijia Hou, Lian Xia, Cheng Cui, Shuo Wan, Ying Jiang, Yu Yang, Qiong Wu, Liping Qiu and Weihong Tan
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC02210K, Edge Article

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Oxidative dehalogenation and denitration by a flavin-dependent monooxygenase is controlled by substrate deprotonation
Panu Pimviriyakul, Panida Surawatanawong and Pimchai Chaiyen
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC01482E, Edge Article

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Biocatalyst–artificial metalloenzyme cascade based on alcohol dehydrogenase
Simone Morra and Anca Pordea
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC02371A, Edge Article

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Design and synthesis of a 4-aminoquinoline-based molecular tweezer that recognizes protoporphyrin IX and iron(III) protoporphyrin IX and its application as a supramolecular photosensitizer
Yosuke Hisamatsu, Naoki Umezawa, Hirokazu Yagi, Koichi Kato and Tsunehiko Higuchi
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC02133C, Edge Article

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Genome Mining, Isolation, Chemical Synthesis and Biological Evaluation of a Novel Lanthipeptide, Tikitericin and N-Truncated Analogues, from the Extremophilic Microorganism Thermogemmatispora Strain T81
Margaret A Brimble, Buzhe Xi, Emma Aitken, Benjamin Baker, Claire Turner, Joanne Harvey, Matthew Stott, Jean Power, Paul Harrs and Rob Keyzers
Chem. Sci., 2018, Accepted Manuscript
DOI: 10.1039/C8SC02170H, Edge Article

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Chemical Science poster prize winner at the Fourth International Conference on Advanced Complex Inorganic Nanomaterials (ACIN 2018)

Fabian Fürmeyer in front of his poster with PhD supervisor Prof. Dr. Eva Rentschler.

Fabian Fürmeyer in front of his poster with PhD supervisor Prof. Dr. Eva Rentschler.

Congratulations to Fabian Fürmeyer (University of Mainz, Germany) who won the Chemical Science poster prize at the Fourth International Conference on Advanced Complex Inorganic Nanomaterials (ACIN 2018). Fabian’s poster was on ‘Dinuclear iron(II) spin crossover compounds based on 1,3,4-thiadiazole bridging ligands’.

The conference took place from 16-20th July in Namur, Belgium, and is jointly organised by the University of Namur, Wuhan University of Technology and Université Catholique de Louvain.

Well done to Fabian from everyone at Chemical Science!

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HOT Chemical Science articles for July

We are happy to present a selection of our HOT articles over the past month. To see all of our HOT referee-recommended articles from 2018, please find the collection here.

As always, Chemical Science articles are free to access.

Disarming the virulence arsenal of Pseudomonas aeruginosa by blocking two-component system signalling
Manibarsha Goswami, Adeline Espinasse and Erin E. Carlson
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC02496K, Edge ArticleDisarming the virulence arsenal of Pseudomonas aeruginosa by blocking two-component system signaling; 10.1039/C8SC02496K; Manibarsha Goswami, Adeline Espinassea and Erin E. Carlson

 

Dynamically imaging collision electrochemistry of single electrochemiluminescence nano-emitters
Cheng Ma, Wanwan Wu, Lingling Li, Shaojun Wu, Jianrong Zhang, Zixuan Chen and Jun-Jie Zhu
Chem. Sci., 2018,9, 6167-6175
DOI: 10.1039/C8SC02251H, Edge Article

Dynamically imaging collision electrochemistry of single electrochemiluminescence nano-emitters; 10.1039/C8SC02251H; Cheng Ma, Wanwan Wu, Lingling Li, Shaojun Wu, Jianrong Zhang, Zixuan Chen and Jun-Jie Zhu

 

Replacing H+ by Na+ or K+ in phosphopeptide anions and cations prevents electron capture dissociation
Eva-Maria Schneeberger and Kathrin Breuker
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC02470G, Edge Article

Replacing H+ by Na+ or K+ in phosphopeptide anions and cations prevents electron capture dissociation; 10.1039/C8SC02470G; Eva-Maria Schneeberger and Kathrin Breuker

 

Reversible coordination of N2 and H2 to a homoleptic S = 1/2 Fe(I) diphosphine complex in solution and the solid state
Laurence R. Doyle, Daniel J. Scott, Peter J. Hill, Duncan A. X. Fraser, William K. Myers, Andrew J. P. White, Jennifer C. Green and Andrew E. Ashley
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC01841C, Edge Article

Reversible coordination of N2 and H2 to a homoleptic S = 1/2 Fe(I) diphosphine complex in solution and the solid state; 10.1039/C8SC01841C; Laurence R. Doyle, Daniel J. Scott, Peter J. Hill, Duncan A. X. Fraser, William K. Myers, Andrew J. P. White, Jennifer C. Green and Andrew E. Ashley

 

Unraveling reaction networks behind the catalytic oxidation of methane with H2O2 over a mixed-metal MIL-53(Al,Fe) MOF catalyst
Ágnes Szécsényi, Guanna Li, Jorge Gascon and Evgeny A. Pidko
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC02376J, Edge Article

Unraveling reaction networks behind the catalytic oxidation of methane with H2O2 over a mixed-metal MIL-53(Al,Fe) MOF catalyst; 10.1039/C8SC02376J; Ágnes Szécsényi, Guanna Li Jorge Gascon and Evgeny A. Pidko

 

Multi-omics and temporal dynamics profiling reveal disruption of central metabolism in Helicobacter pylori on bismuth treatment
Bingjie Han, Zhen Zhang, Yanxuan Xie, Xuqiao Hu, Haibo Wang, Wei Xia, Yulan Wang, Hongyan Li, Yuchuan Wang and Hongzhe Sun
Chem. Sci., 2018, Advance Article
DOI: 10.1039/C8SC01668B, Edge Article

Multi-omics and temporal dynamics profiling reveal disruption of central metabolism in Helicobacter pylori on bismuth treatment; 10.1039/C8SC01668B; Bingjie Han, Zhen Zhang, Yanxuan Xie, Xuqiao Hu, Haibo Wang, Wei Xia, Yulan Wang, Hongyan Li, Yuchuan Wang and Hongzhe Sun

 

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