Archive for the ‘Hot Articles’ Category

HOT Chemical Science articles for October

Ligation of anti-cancer drugs to self-assembling ultrashort peptides by click chemistry for localized therapy
Michael R Reithofer, Kiat-Hwa Chan, Anupama Lakshmanan, Dang Hoang Lam, Archana Mishra, Began Gopalan, Mangesh Joshi, Shu Wang and Charlotte A. E. Hauser
Chem. Sci., 2013, Accepted Manuscript
DOI: 10.1039/C3SC51930A, Edge Article

Free to access until 1st December 2013


Inaccessibility of the μ-hydride species in [FeFe] hydrogenases
Arndt R. Finkelmann, Martin T. Stiebritz and Markus Reiher
Chem. Sci., 2014, Advance Article
DOI: 10.1039/C3SC51700D, Edge Article

Free to access until 1st December 2013


Development of cell-impermeable coelenterazine derivatives
Eric Lindberg, Shin Mizukami, Keiji Ibata, Takashi Fukano, Atsushi Miyawaki and Kazuya Kikuchi
Chem. Sci., 2013,4, 4395-4400
DOI: 10.1039/C3SC51985F, Edge Article

Free to access until 1st December 2013


Mechanism of electrophilic fluorination with Pd(IV): fluoride capture and subsequent oxidative fluoride transfer
Jochen R. Brandt, Eunsung Lee, Gregory B. Boursalian and Tobias Ritter
Chem. Sci., 2014, Advance Article
DOI: 10.1039/C3SC52367E, Edge Article

Free to access until 1st December 2013

Click here for more free HOT Chemical Science articles for October!

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Carbon nanotube fragments: [8]cycloparaphenylene, its radical cation and charge-transfer dimer

Carbon nanotube (CNT) fragments are exciting materials for the fields of supramolecular chemistry and nanotechnology. This is due to their tunable optical and physical properties, as well as their potential for host-guest chemical interactions. The authors from Boston and Drexel Universities and co-workers, report here for the first time, the synthesis of the radical cation of [8]-cycloparaphenylene, prepared by reaction of [8]-cycloparaphenylene with the oxidant triethyloxonium hexachloroantimonate (Et3O+SbCl6-). A vivid colour change, from yellow to orange to deep purple, accompanied the oxidation. The product remained stable when dry for several days, and was readily reduced back to [8]-cycloparaphenylene on reaction with zinc dust.

Surprisingly, electron paramagnetic resonance (EPR) experiments on solutions of the radical cation, did not give detailed information, other than a characteristic signal for one unpaired electron.  The material also proved difficult to crystallise in a pure form. Therefore, the focus shifted to photophysical, electrochemical and theoretical properties. As seen in the figure above, on the right, the radical cation of [8]-cycloparaphenylene has two major absorptions at at 535 and 1115nm, which follow closely the values determined by density functional calculations (DFT), and are characteristically different to the parent neutral material.

Theoretical calculations also suggest a change to a highly delocalised structure in the radical cation and its dimer with the neutral compound, compared to benzene like character in [8]-cycloparaphenylene. This should prove useful for potential applications in electronic and photovoltaic devices. Detailed results from computational studies on the electronic structures of the radical cation of [8]-cycloparaphenylene ([8]-CPP) and its resonance dimer, as well as the 6, 10 and 12 ring-containing ‘hoops’ are given. This article sheds valuable new light on the properties of  intra- and inter-molecularly delocalised systems based on cycloparaphenylenes.

Read this HOT Chemical Science Edge Article today!

Photophysical and theoretical investigations of the [8]cycloparaphenylene radical cation and its charge-resonance dimer
Matthew R. Golder, Bryan M. Wong and Ramesh Jasti
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC51861B

Kevin Murnaghan is a guest web-writer for Chemical Science. He is currently a Research Chemist in the Adhesive Technologies Business Sector of Henkel AG & Co. KGaA, based in Düsseldorf, Germany. His research interests focus primarily on enabling chemistries and technologies for next generation adhesives and surface treatments. Any views expressed here are his personal ones and not those of Henkel AG & Co. KGaA.

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Half-mustard gas blues

In the presence of half mustard, the dithiol does not react with the squaraine dye so the dye’s blue colour is visible

Scientists in the US are trying to develop a new detection system for the chemical warfare agent mustard gas

There is no antidote to mustard gas, which burns the skin, eyes and respiratory system. Victims not killed by an attack are left severely incapacitated. It is an environmentally persistent chemical and its cruel effects can take around 12 hours to take hold. A cheap and simple sensor to alert civilians and emergency responders to its presence is obviously desirable. 

Eric Anslyn and Vinod Kumar at the University of Texas at Austin are getting closer to such a system. With the knowledge that chlorine atoms in mustard gas will readily react with good nucleophiles like thiols, they have designed a dithiol and squaraine dye system to give a clear colour change in the presence of the mustard gas simulant 2-chloroethyl ethyl sulfide, also known as half mustard. 


Read the full article in Chemistry World» 

Read the original journal article in Chemical Science:
A selective and sensitive chromogenic and fluorogenic detection of a sulfur mustard simulant
Vinod Kumar and Eric V. Anslyn  
Chem. Sci., 2013, Advance Article, DOI: 10.1039/C3SC52259H 

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Crushing the insolubility of graphite with solid-state Diels-Alder reactions

Researchers from South Korea have reported the chemical modification of graphene nanoplatelets using a solid-state technique, which has led to a dramatic improvement in their solubility in a wide variety of solvents.

c3sc51546j-f1.gif

(a) Mechanochemically driven solid-state Diels–Alder reaction between active carbon species by ball-milling in the presence of maleic anhydride (MA) or maleimide (MI). SEM images: (b) pristine graphite, (c) MA-GnPs, (d) MI-GnPs.

Graphene, a single-layer two-dimensional sheet of aromatic carbon atoms, has attracted a lot of interest since the realization of its unique electric, optical, mechanical and thermal properties. These properties can be further exploited and improved upon the functionalization, either covalently or non-covalently, of the graphene surface. The catch-22 is that unfunctionalized graphene is inherently insoluble, making it difficult to modify chemically, but its properties can typically be improved solely through chemical modification. As a result, much work has been carried out to develop methods of facilitating the covalent modification of graphene – in higher yields and more easily than currently possible.

Jong-Beom Baek and his team at the Ulsan National Institute of Science and Technology (UNIST) have achieved such a feat by increasing the solubility of graphene nanoparticles using, for the first time, a dry ball-milling reaction. Using Diels-Alder [4+2] cycloaddition reactions between graphene nanoplatelets (derived from the ball-milling of graphite) and either maleic anhydride or maleimide, O and N atoms were selectively introduced to the edges of graphene nanoplatelets in reasonable yields. As a result, the nanoplatelets showed good dispersability in both protic and polar aprotic solvents, including in neutral water. This is a significant achievement, as the Diels-Alder reaction allows for a large range of functional groups to be attached to the graphene edges and offers a general method for the chemical modification of graphene.

– by Anthea Blackburn

Read this HOT ChemComm article in full!

Mechanochemically driven solid-state Diels–Alder reaction of graphite into graphene nanoplatelets
Jeong-Min Seo, In-Yup Jeon and Jong-Beom Baek
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC51546J, Edge Article

Anthea Blackburn is a guest web writer for Chemical Science.  Anthea is a graduate student hailing from New Zealand, studying at Northwestern University in the US under the tutelage of Prof. Fraser Stoddart (a Scot), where she is working on the incorporation of porphyrins into topologically interesting and mechanically interlocked molecules. When time and money allow, she is ambitiously attempting to visit all 50 US states before graduation.

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HOT Chemical Science articles for September

Metallohelices with activity against cisplatin-resistant cancer cells; does the mechanism involve DNA binding?
Viktor Brabec, Suzanne E. Howson, Rebecca A. Kaner, Rianne M. Lord, Jaroslav Malina, Roger M. Phillips, Qasem M. A. Abdallah, Patrick C. McGowan, Alison Rodger and Peter Scott
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC51731D, Edge Article

Free to access until 13th October 2013


Topological isomerism in a chiral handcuff catenane
Karel J. Hartlieb, Anthea K. Blackburn, Severin T. Schneebeli, Ross S. Forgan, Amy A. Sarjeant, Charlotte L. Stern, Dennis Cao and J. Fraser Stoddart
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC52106K, Edge Article

Free to access until 13th October 2013


Development of cell-impermeable coelenterazine derivatives
Eric Lindberg, Shin Mizukami, Keiji Ibata, Takashi Fukano, Atsushi Miyawaki and Kazuya Kikuchi
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC51985F, Edge Article

Free to access until 13th October 2013


Monolayers of trimesic and isophthalic acid on Cu and Ag: the influence of coordination strength on adsorption geometry
Izabela Cebula, Hao Lu, Michael Zharnikov and Manfred Buck
Chem. Sci., 2013, Accepted Manuscript
DOI: 10.1039/C3SC52137K, Edge Article

Free to access until 13th October 2013

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Handcuff catenanes

Scientists in the US have successfully used a template directed protocol to synthesise two topological isomers of a handcuff catenane. Handcuff catenanes are mechanically interlocked molecules where two covalently bound rings, called the ditopic host, are interlocked by a third ring threaded through both rings of the ditopic host. Only three other mechanically interlocked molecules with the handcuff topology have been reported before – they are very difficult to synthesise.

Previous handcuff catenanes have all been achiral and have only demonstrated one way to thread the third ring through the diptopic host. The handcuff catenane made by Fraser Stoddart and colleagues at Northwestern University has two distinctive topologies – it is impossible for one to be converted into the other, unless covalent bonds are broken and then re-made. The stereochemistry demonstrated by Stoddart’s handcuff catenanes is interesting because as well as being topologically chiral they also display Euclidian chirality.

Handcuff catenane synthesis

The different isomers of the handcuff catenane and their relationship to one another

The different isomers of the handcuff catenane and their relationship to one another
A template directed synthesis between the π-electron-rich bis-1,5-dioxynaphtho[50]crown-14 and the precursors of two fused π-electron-deficient cyclobis(paraquat-p-phenylene) cyclophanes was used to make the topologically complex molecules. The handcuff catenanes could have future applications in molecular switches.


This article appeared in Chemistry World on 9th September 2013.

You can also read the original journal article in Chemical Science:
Topological isomerism in a chiral handcuff catenane
Karel J. Hartlieb, Anthea K Blackburn, Severin Thomas Schneebeli, Ross S Forgan, Amy Sarjeant, Charlotte L Stern, Dennis Cao and J. Fraser Stoddart
Chem. Sci., 2013, Accepted Manuscript, DOI: 10.1039/C3SC52106K

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HOT Chemical Science articles for August

Helical poly(arginine) mimics with superior cell-penetrating and molecular transporting properties
Haoyu Tang, Lichen Yin, Kyung Hoon Kim and Jianjun Cheng
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC51328A, Edge Article

Free to access until 29th September 2013


Self-assembled light-driven photosynthetic-respiratory electron transport chain hybrid proton pump
David Hvasanov, Joshua R. Peterson and Pall Thordarson
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC51780B, Edge Article

Free to access until 29th September 2013


3D optical imaging of multiple SERS nanotags in cells
Sarah McAughtrie, Katherine Lau, Karen Faulds and Duncan Graham
Chem. Sci., 2013,4, 3566-3572
DOI: 10.1039/C3SC51437D, Edge Article

Free to access until 29th September 2013


Rotationally inelastic scattering of CD3 and CH3 with He: comparison of velocity map-imaging data with quantum scattering calculations
Ondřej Tkáč, Alan G. Sage, Stuart J. Greaves, Andrew J. Orr-Ewing, Paul J. Dagdigian, Qianli Ma and Millard H. Alexander
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC52002A, Edge Article

Free to access until 29th September 2013


One pathway, many compounds: heterologous expression of a fungal biosynthetic pathway reveals its intrinsic potential for diversity
Zahida Wasil, Khomaizon A. K. Pahirulzaman, Craig Butts, Thomas J. Simpson, Colin M. Lazarus and Russell J. Cox
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC51785C, Edge Article

Free to access until 29th September 2013


Interrogating the photogenerated Ir(IV) state of a water oxidation catalyst using ultrafast optical and X-ray absorption spectroscopy
Michael T. Vagnini, Michael W. Mara, Michael R. Harpham, Jier Huang, Megan L. Shelby, Lin X. Chen and Michael R. Wasielewski
Chem. Sci., 2013, Advance Article
DOI: 10.1039/C3SC51511G, Edge Article

Free to access until 29th September 2013

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Seeding removes barrier to curious cocrystal

After seven years of work, a team of chemists based in four labs across the globe has successfully prepared a cocrystal previously believed to be unobtainable.

Cocrystals are crystalline materials composed of two or more molecules held together within the same crystal lattice. Cocrystallisation is significant in the pharmaceutical industry, where drug molecules are screened for cocrystal formation in order to improve their solubility, stability and bioavailability. This has the added advantage of increasing the number of crystal forms that can be considered for drug formulation while simultaneously maximising patent protection.

Despite a computational study suggesting a stable cocrystal should form between caffeine and benzoic acid, all previous attempts over the last 60 years have failed. ‘When a cocrystal doesn’t form, we like to understand why that is – patients could miss out on better medical treatment if we miss out on crystal forms,’ says Dejan-Krešimir Bučar at the University of Cambridge in the UK, who led the study. ‘We hypothesised that a kinetic barrier hindered cocrystal formation, so our idea was to add a molecular species similar to that found in the nucleus of the caffeine·benzoic acid cocrystal as a seed to facilitate crystallisation.

Read the full article in Chemistry World»

Read the original journal article in Chemical Science:
The curious case of (caffeine)⋅(benzoic acid): How heteronuclear seeding allowed the formation of an elusive cocrystal
Dejan-Kresimir Bucar, Graeme Matthew Day, Ivan Halasz, Geoff G. Z. Zhang, John R. G. Sander, David G Reid, Leonard R. G. MacGillivray, M J Duer and William Jones  
Chem. Sci., 2013, Accepted Manuscript, DOI: 10.1039/C3SC51419F

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Nowhere for hydrazine to hide

Scientists from the US and South Korea have developed a probe that can detect the highly toxic chemical hydrazine in a variety of different environments, including living cells.

Hydrazine plays an important role in a number of industrial processes. It’s used in pesticides, in nuclear and conventional electric power plants to reduce corrosion, and as a gas-forming agent in air bags. It’s even found in rocket fuel.

Although contact with small amounts of hydrazine is unlikely to cause harm, long term exposure can damage the liver, kidneys and central nervous system. Hydrazine has also been classified by the US Environmental Protection Agency (EPA) as a probable carcinogen.

Accidental leakage of hydrazine into the environment is rare and as hydrazine breaks down rapidly in oxygen, finding high levels of hydrazine in the environment is unlikely. However, hydrazine exposure in the workplace can be a real danger for individuals who come into contact with it. This makes the development of hydrazine sensors an important area of research.

The probe reacts with hydrazine to make a five-membered ring, resulting in a fluorescent response and a visible colour change

Read the full article in Chemistry World»

Read the original journal article in ChemComm:
Naphthalimide trifluoroacetyl acetonate: a hydrazine-selective chemodosimetric sensor
Min Hee Lee, Byungkwon Yoon, Jong Seung Kim and Jonathan L. Sessler  
Chem. Sci., 2013, Advance Article, DOI: 10.1039/C3SC51813B

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Destroying stable foam on demand

The first example of stable and environmentally friendly foam that can be broken down by any one of three external stimuli has been developed by an international team of scientists.

From left to right: foam before and after an increase in temperature, UV irradiation and exposure to a magnetic field

Foams are commonly applied in the clean-up of chemical spills, where they are sprayed over large areas to prevent evaporation of volatile and harmful organic materials. While this demands stability, the foam then needs to be destabilised for transport due to its voluminous nature, often accomplished by the addition of an anti-foaming agent. The resulting liquid mixture can then be removed and the components recovered. Recent studies have tried to create stable foams which can be destabilised by external stimuli to remove the need for the addition of extra chemicals.

Orlin Velev and Stephanie Lam of North Carolina State University have collaborated with Anne-Laure Fameau from the French National Institute for Agricultural Research, to pool their multidisciplinary backgrounds in foams and emulsions, and colloids.

Read the full article in Chemistry World»

Read the original journal article in Chemical Science:
Multi-stimuli responsive foams combining particles and self-assembling fatty acids
Anne-Laure Fameau, Stephanie Lam and Orlin D. Velev  
Chem. Sci., 2013, Advance Article, DOI: 10.1039/C3SC51774H

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