Author Archive

Hot paper: Studying electrostatic self-assembly

Generating solids from liquid and gases via crystallisation is an important process both theoretically and technologically. In this hot paper, scientists from Harvard University in the group of George Whitesides, describe a model system for studying the self-assembly processes important in crystallisation. In particular they study millimeter-sized objects in systems in which charge-charge interactions dominate. The authors find that self-assembly is robust. Closely-packed crystalline structures are formed under many distinct experimental conditions. At least three classes of structure can be formed during self-assembly: crystals, chains and rosettes.

A simple two-dimensional model system to study electrostatic-self-assembly
Soft Matter, 2012, 8, 9771.  DOI: 10.1039/c2sm26192h
(free to read for a short time)

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Hot paper: Tutorial review of neutron scattering and molecular dynamics simulations

This tutorial review by members of The Polymers and Soft Matter Research Group (in the Material Physics Centre – Joint Centre of the University of the Basque Country and the Spanish Scientific Research Council) focuses on the combined use of molecular simulations and neutron scattering as a powerful tool to investigate structure and dynamics in polymers. The tutorial review describes several examples of how this strategy has been the right one to investigate the structural and dynamic features of linear homopolymer melts. The authors suggest that this approach will be important in addressing problems in more complex polymer systems such as biomacromolecules.

Neutron scattering and molecular dynamics simulations: synergetic tools to unravel structure and dynamics in polymers
Soft Matter, 2012, 8, 8257.  DOI: 10.1039/c2sm26061a
(free to read for a short time)

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Soft Matter 2012 Reviews in Biophysics

Soft Matter welcomes submissions on the biophysics of soft matter systems, for example:

•    Membranes and lipid bilayers
•    Biomimetic materials
•    Cell mechanics and adhesion
•    Self-assembly of biomacromolecules
•    DNA and protein dynamics and folding
•    Buckling/jamming of cell layers and tissues
•    Physics of drug delivery systems
•    Flagella and motility

Also, see our recently published themed issue on ‘Polyelectrolytes in biology and soft matter‘, with guest editors Michael Rubinstein and Garegin Papoian.

The following review content will be free for a limited time:

Assembly and stability of α-helical membrane proteins
Matthias Heyden, J. Alfredo Freites, Martin B. Ulmschneider, Stephen H. White and Douglas J. Tobias
Soft Matter, 2012, 8, 7742-7752, DOI: 10.1039/C2SM25402F

Lipid membranes in contact with aqueous phases of polymer solutions
Rumiana Dimova and Reinhard Lipowsky
Soft Matter, 2012, 8, 6409-6415, DOI: 10.1039/C2SM25261A

Beyond the lipid-bilayer: interaction of polymers and nanoparticles with membranes
Matthias Schulz, Adekunle Olubummo and Wolfgang H. Binder
Soft Matter, 2012, 8, 4849-4864, DOI: 10.1039/C2SM06999G

Revealing structural and dynamical properties of high density lipoproteins through molecular simulations
Artturi Koivuniemi and Ilpo Vattulainen
Soft Matter, 2012, 8, 1262-1267, DOI: 10.1039/C1SM06742G

Inhibiting, promoting, and preserving stability of functional protein fibrils

Owen Griffith Jones and Raffaele Mezzenga
Soft Matter, 2012, 8, 876-895, DOI: 10.1039/C1SM06643A

Adsorption and self-assembly of biosurfactants studied by neutron reflectivity and small angle neutron scattering: glycolipids, lipopeptides and proteins
Jeffrey Penfold, Robert K. Thomas and Hsin-Hui Shen
Soft Matter, 2012, 8, 578-591, DOI: 10.1039/C1SM06304A

Computer simulations of fusion, fission and shape deformation in lipid membranes
Kai Yang and Yu-qiang Ma
Soft Matter, 2012, 8, 606-618, DOI: 10.1039/C1SM05903C

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Hot paper: Stability of theoretically predicted tangles in chiral nematic cells

Disclination lines are microscopic objects in nematic liquid crystals that mediate forces between dispersed objects and modify the optical response of the medium. These are interesting properties for the production of complex materials and micro devices. Colloidal particles are often introduced to nematic liquid crystals as a way of increasing the number of disclination lines. Colloidal dispersions in chiral nematics have been shown to undergo spontaneous entanglement to give complex disclination networks.

In this hot paper, scientists in Ljubljana study the stability of theoretically predicted tangles in chiral nematic cells. Colloidal dimers in π-twisted chiral nematic cells are used as a model system. The authors developed a method that uses an analytical approximation arrangement of the disclination and found that the stability of a structure results from the individual stability of each tangle.

Stability and rewiring of nematic braids in chiral nematic colloids
Soft Matter, 2012, 8, 8595. DOI: 10.1039/c2sm25952d
(free to read for a short time)

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Hot paper: Capillary interactions among spherical particles at curved liquid interfaces

The role of adsorbed particles on interfaces between immiscible fluids is important in many applications such as the stabilisation of droplets in Pickering emulsions in foods, cosmetics and oil recovery. They are also fundamentally interesting, particularly in materials science, in studies on the formation of functional membranes from monolayers of nano- or micro-particles. The geometry of the fluid interface must be considered as it is not always planar.

This hot paper by Dinsmore and colleagues analyses the adsorption of one or more spherical particles on a fluid interface that is initially curved in an anisotropic shape. The authors study the effect of interfacial curvature on the binding energy and on the associated capillary force exerted on the particles. The paper reports that the binding energy of one particle on a curved interface depends on the interface shape for the particle and not the local shape. Conversely, the binding energy for two particles depends only on the local shape.

Capillary interactions among spherical particles at curved liquid interfaces
Soft Matter, 2012, 8, 8582.
DOI: 10.1039/c2sm25871d (free to read for a short time)

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Hot paper: Review of electrostatics of DNA compaction in viruses, bacteria and eukaryotes

This review by Maria Barbi and colleagues from the “Multiscale Modelling of Living Matter” group covers many aspects of DNA packaging in viruses, bacteria through to eukaryotes. The review discusses the electrostatic interactions of DNA, proteins and ions; mechanisms of DNA compaction; the way different condensation mechanisms are implemented in vivo; functional tuning of DNA compaction and finally gives an evolutionary perspective on the subject.

Electrostatics of DNA compaction in viruses, bacteria and eukaryotes: functional insights and evolutionary perspective
Soft Matter, 2012, 8, 9285
DOI: 10.1039/c2sm25789k
(free to read for a short time)

This review is from the Polyelectrolytes in Soft Matter and Biology themed issue. Click on the link to view the entire themed issue.

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Soft Matter poster prize winners at Gelsympo2012

Congratulations to the poster prize winners at the 9th International Gel Symposium 2012!

The four joint winners were Tasuku Nakajima (Hokkaido University), Xiang Li (The University of Tokyo), Eri Kawamura (Tokyo University of Science) and Shinji Sugiura (National Institute of Advanced Industrial Science and Technology) (not pictured). Each winner won a year’s online subscription to either Soft Matter, Journal of Materials Chemistry or Polymer Chemistry. The Biomaterials Science winner won a free copy of ‘Healthy, Wealthy, Sustainable World’ by John Emsley from RSC books.


From left to right:  Eri Kawamura, Xiang Li and Tasuku Nakajima.

Tasuku Nakajima (Soft Matter winner)
“A Universal “Molecular Stent” Method to Toughen any Hydrogels Based on Double Network Concept”

Xiang Li (Polymer Chemistry winner)
“Application of Tetra-PEG gel as a high-performance separation medium for biomolecules”

Eri Kawamura (Journal of Materials Chemistry winner)
“Electrophoretic adhesion of stimuli-responsive hydrogels utilizing polyion complex and segmental entanglement of polymers”

Shinji Sugiura (Biomaterials Science winner)
“Cell Micropatterning and Manipulation on Photodegradable Hydrogel Sheet”

The 9th International Gel Symposium was held  9th – 12th October in Tsukuba, Japan.

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This week’s hot papers – read for free until November 19th!

Effect of lipid architecture on cubic phase susceptibility to crystallisation screens

Many therapeutics for diseases such as Alzheimer’s disease and Parkinson’s disease target membrane proteins. Structural characterisation of the proteins is required to produce better drugs, but growing high quality crystals for X-ray diffraction analysis can be a challenge. In this hot paper (front cover of Soft Matter Issue 26), Conn and co-workers report on the structural characterisation of four different lipids. The lipids were successfully used in the growth of membrane protein crystals, the structures of which were studied using SAXS and WAXS.

Soft Matter, 2012, 8, 6884-6896


Swelling-induced long-range ordered structure formation in polyelectrolyte hydrogel

In this hot paper (front cover of Soft Matter Issue 31), Gong and co-workers describe a strategy for introducing long-range ordered structure in amorphous hydrogels using dynamic mechano-complexation coupling in a non-equilibrium process. They report the swelling of a hydrogel consisting of poly(2,20-disulfonyl-4,40-benzidine terephthalamide) (PBDT). The mechanism of non-equilibrium structure formation is discussed and may provide insights into the formation of biomacromolecules, such as the growth of biological organs.

Soft Matter, 2012, 8, 8060-8066

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This week’s hot papers – Read for free until November 12th!

Simulation of fusion-mediated nanoemulsion interactions with model lipid bilayers

Coarse-grain simulations have been used to model atomistic structures of biological emulsions such as lipoproteins. This hot paper by Baker and co-workers presents a new coarse-grained perfluorooctylbromide (PFOB) model. The paper focuses on the initial step of the contact-facilitated delivery mechanism. This work could be used in new studies to understand the delivery mechanism of cargo molecules to target cells trough membrane fusion.

Soft Matter, 2012, 8, 7024–7035

Biomimetic fabrication of genetically engineered collagen peptide-assembled freestanding films reinforced by quantum dot joints

The biomimetic fabrication of nanomaterials is very important in many applications. Biomimetic films using a molecular self-assembly approach can be fragile and have a Young’s modulus less than 10 GPa. In this hot paper, Matsui and co-workers describe the preparation of freestanding films using collagen peptides and quantum dots. The films have a Young’s modulus of ~20 GPa and other interesting mechanical properties. The new films could potentially be applied to substrate-free electronics, ultrafast filtration and tissue engineering.

Soft Matter, 2012, 8, 6871-6875

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Soft Matter Principles of Microfluidics themed issue out now!

Soft Matter Principles of Microfluidics themed issue has been published. Guest Editors Lydéric Bocquet, Todd Squires and Annie Colin introduce the issue in their Editorial.
The front cover showcases work by Valérie Taly, Jean-Christophe Baret and co-works in their paper ‘Dynamics of molecular transport by surfactants in emulsions’.

The issue also includes 6 Review articles!:
Margination and segregation in confined flows of blood and other multicomponent suspensions
Amit Kumar and Michael D. Graham
Exploring emulsion science with microfluidics
Nicolas Bremond and Jérôme Bibette
Microfluidic systems for single DNA dynamics
Danielle J. Mai, Christopher Brockman and Charles M. Schroeder
Interacting viscous instabilities in microfluidic systems
Thomas Cubaud and Thomas G. Mason
Microscale nuclear magnetic resonance: a tool for soft matter research
Vlad Badilita, Robert Ch. Meier, Nils Spengler, Ulrike Wallrabe, Marcel Utz and Jan G. Korvink
Soft diffuse interfaces in electrokinetics – theory and experiment for transport in charged diffuse layers
Alexander C. Barbati and Brian J. Kirby

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