Professor Michael Burkart delivers OBC lecture award

Professor Michael Burkart from the University of California, San Diego, delivered the Organic & Biomolecular Chemistry award lecture at the RSC’s Directing Biosynthesis conference in Durham, UK last week. Professor Burkart lecture was entitled Modular Thinking – Explorations in Activity and Function.

Professor Burkart’s recent OBC publications include:

Synthetic studies on the mycolactone core
Kwang-Seuk Ko, Matthew D. Alexander, Shaun D. Fontaine, James E. Biggs-Houck, James J. La Clair and Michael D. Burkart
Org. Biomol. Chem., 2010, DOI: 10.1039/C0OB00540A

Preparation of FRET reporters to support chemical probe development
Timothy L. Foley, Adam Yasgar, Christopher J. Garcia, Ajit Jadhav, Anton Simeonov and Michael D. Burkart
Org. Biomol. Chem., 2010, DOI: 10.1039/C0OB00322K

Mechanism-based crosslinking as a gauge for functional interaction of modular synthases
Andrew S. Worthington, Douglas F. Porter, Michael D. Burkart,
Org. Biomol. Chem., 2010, (8),1769-1772

The OBC lecture award is given to chemists who have made a significant research contribution to organic or bioorganic chemistry, and ideally who have had an independent research career of between 8 and 15 years. Nominations for the 2011 OBC Lecture Award will be open next month.

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Mark Wood’s article promoted in Highlights of Chemical Biology

Bound to succeed for gene therapy

by David Barden

An all-in-one solution to improve gene therapy in vivo has been devised by US scientists.

Correcting the genetic code of malfunctioning cells, known as gene therapy, has enormous potential to cure diseases. However, two key challenges are getting the new DNA into the cell and tracking it once inside. Now a group led by Mark Woods at Oregon Health and Sciences University in Portland has shown that these two problems can be solved in one stroke, with clear benefits for the development of new gene therapy treatments.

DNA has a high negative charge, meaning that it is repelled by biological membranes such as cell walls. One way of getting it into a cell is to mask the charge by bundling it with a positively charged polymer. Tracking this process in real-time is highly desirable, says Woods and is currently done by attaching a contrast agent to the polymer – but this can fundamentally modify its properties, he says. Instead Woods and colleagues optimised the polymer so that it already contains a contrast agent, which they say will provide ‘a valuable addition to the gene therapy tool kit.’

Woods realised that a polymeric europium complex that they had previously developed as a contrast enhancer in magnetic resonance imaging (MRI) might also be suitable as a transfer agent as it had a high positive charge. Testing their complex out on a stretch of DNA encoding the well-known green fluorescent protein showed that it aided migration into cells. In addition, the binding of the complex to the DNA changed the contrast signal produced, ‘potentially providing a means of imaging the delivery and release of a gene,’ says Woods.

However, he adds, improvements to the transfer efficiency and contrast enhancement are needed before such complexes can be considered as gene therapy agents. Altering the lipophilicity of the polymer, adding copolymers to the chain, or adjusting the charge on the complex should afford routes to more effective agents, he suggests.

Peter van Zijl, an expert in MRI methodologies at Johns Hopkins University in Baltimore, US, says ‘This work constitutes another important step forward in the design of compounds that can function both as MRI contrast agents and gene delivery agents,’ adding that ‘this proof of principle will greatly stimulate future efforts to develop transfection agents that can report on their efficacy through MRI.’

Read the article and comment on the blog

Polymeric PARACEST MRI contrast agents as potential reporters for gene therapy
Yunkou Wu, Christiane E. Carney, Michael Denton, Elaine Hart, Piyu Zhao, Daniel N. Streblow, A. Dean Sherry and Mark Woods, Org. Biomol. Chem., 2010
DOI: 10.1039/c0ob00087f

Original story in Highlights of Chemical Biology

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HOT: Can carbohydrates and liposomes deliver hepatocytes?

Seeberger and colleagues design carbohydrate-functionalized β-cyclodextrins (βCDs) and liposomes for hepatocyte-specific delivery.

Find out about the detection of hepatocyte binding and uptake in this free to access until October 8th OBC HOT article.

Design, synthesis and biological evaluation of carbohydrate-functionalized cyclodextrins and liposomes for hepatocyte-specific targeting
Gonçalo J. L. Bernardes, Raghavendra Kikkeri, Maha Maglinao, Paola Laurino, Mayeul Collot, Sung You Hong, Bernd Lepenies and Peter H. Seeberger
Org. Biomol. Chem., 2010, Advance Article
DOI: 10.1039/C0OB00372G , Paper

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OBC Issue 19 Inside Cover: Gether and Stromgaard

Ulrik Gether, Kristian Stromgaard and colleagues at University of Copenhagen explore the structure-activity relationships of the first small molecule inhibitor of PICK 1, a potential drug target against brain ischemia, pain and cocain addiction.

It is the inside cover of OBC Issue 19 and it will be free to access until October 19th.

Read it and try to PICK 1 comment!

Structure–activity relationships of a small-molecule inhibitor of the PDZ domain of PICK1
Anders Bach, Nicolai Stuhr-Hansen, Thor S. Thorsen, Nicolai Bork, Irina S. Moreira, Karla Frydenvang, Shahrokh Padrah, S. Brøgger Christensen, Kenneth L. Madsen, Harel Weinstein, Ulrik Gether and Kristian Strømgaard
Org. Biomol. Chem., 2010, 8, 4281-4288
DOI: 10.1039/C0OB00025F

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OBC Cover Issue 19: Sergeants and soldiers

Dan Pantos and co-workers at Cambridge University explore the ‘sergeants and soldiers’ behaviour where a chiral derivative, amino acid derivatives of naphtalene-diimides (NDIs), imposes its chirality on a structure formed out of achiral derivatives.

Supramolecular systems, nanotubes, C60… everything included in this very interesting paper, front cover of OBC Issue 19.

Reading it is a must (although not an order!) and commenting on it an option
Free to access until 19th October

The sergeants-and-soldiers effect: chiral amplification in naphthalenediimide nanotubes
Tom W. Anderson, Jeremy K. M. Sanders and G. Dan Pantoş
Org. Biomol. Chem., 2010, 8, 4274-4280
DOI: 10.1039/C0OB00027B

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Top ten most accessed articles in July

This month sees the following articles in Organic & Biomolecular Chemistry that are in the top ten most accessed:-

Heterocycles in organic synthesis: thiazoles and triazoles as exemplar cases of synthetic auxiliaries
Alessandro Dondoni
Org. Biomol. Chem., 2010, 8, 3366-3385, DOI: 10.1039/C002586K

In water, on water, and by water: mimicking nature’s aldolases with organocatalysis and water
Nobuyuki Mase and Carlos F. Barbas, III
Org. Biomol. Chem., 2010, 8, 4043-4050, DOI: 10.1039/C004970K

Folding and self-assembly of aromatic and aliphatic urea oligomers: Towards connecting structure and function
Lucile Fischer and Gilles Guichard
Org. Biomol. Chem., 2010, 8, 3101-3117, DOI: 10.1039/C001090A

Nitrone protecting groups for enantiopure N-hydroxyamino acids: synthesis of N-terminal peptide hydroxylamines for chemoselective ligations
S. Irene Medina, Jian Wu and Jeffrey W. Bode
Org. Biomol. Chem., 2010, 8, 3405-3417, DOI: 10.1039/C004490C

Intramolecular Michael addition reaction for the synthesis of benzylbutyrolactones
Hu He, Li-Xin Dai and Shu-Li You
Org. Biomol. Chem., 2010, 8, 3207-3210, DOI: 10.1039/B924770J

Expedient, one-pot preparation of fused indoles via CAN-catalyzed three-component domino sequences and their transformation into polyheterocyclic compounds containing pyrrolo[1,2-a]azepine fragments
Padmakar A. Suryavanshi, Vellaisamy Sridharan and J. Carlos Menéndez
Org. Biomol. Chem., 2010, 8, 3426-3436, DOI: 10.1039/C004703A

Ultrafast Grignard addition reactions in the presence of water
Gyorgyi Osztrovszky, Torkil Holm and Robert Madsen
Org. Biomol. Chem., 2010, 8, 3402-3404, DOI: 10.1039/C0OB00170H

A three-step tandem process for the synthesis of bicyclic γ-lactams
Fiona I. McGonagle, Lindsay Brown, Andrew Cooke and Andrew Sutherland
Org. Biomol. Chem., 2010, 8, 3418-3425, DOI: 10.1039/C004695G

Total synthesis of decarestrictine I and botryolide B via RCM protocol
Palakodety Radha Krishna and T. Jagannadha Rao
Org. Biomol. Chem., 2010, 8, 3130-3132, DOI: 10.1039/C004556J

Picolylamine as an organocatalyst template for highly diastereo- and enantioselective aqueous aldol reactions
Thomas C. Nugent, M. Naveed Umar and Ahtaram Bibi
Org. Biomol. Chem., 2010, 8, 4085-4089, DOI: 10.1039/C0OB00049C

Why not take a look at the articles today and blog your thoughts and comments below.

Fancy submitting an article to Organic & Biomolecular Chemistry? Then why not submit to us today or alternatively email us your suggestions.

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HOT: Deuterium as a protecting group

Can Deuterium act as a protecting group to prevent unwanted hydrogen atom transfers?

Mark Wood and colleagues have the answer here.

Reviewers were very impressed with it and we made it a HOT article.

Curious? Find out more! Free to access until the end of September.

Synthetic use of the primary kinetic isotope effect in hydrogen atom transfer: generation of α-aminoalkyl radicals
Mark E. Wood, Sabine Bissiriou, Christopher Lowe, Andrew M. Norrish, Katell Sénéchal, Kim M. Windeatt, Simon J. Coles and Michael B. Hursthouse
Org. Biomol. Chem., 2010, Advance Article
DOI: 10.1039/C0OB00205D , Paper

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HOT: Chemistry of a hydrazone-disulfide macrocycle

David Leigh and co-workers talk about a macrocycle that contains both a hydrazone and a disulfide linkage.
Find out more about the synthesis, the structure and the different chemistry they perform on it in this very interesting paper.

Excellent reviews from the referees and thumbs up from the editorial office make it a HOT paper.

Free to access until the end of September.

Synthesis and solid state structure of a hydrazone-disulfide macrocycle and its dynamic covalent ring-opening under acidic and basic conditions
Max von Delius, Edzard M. Geertsema, David A. Leigh and Alexandra M. Z. Slawin
Org. Biomol. Chem., 2010, Advance Article
DOI: 10.1039/C0OB00214C, Paper

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HOT: Nitroalkenes and nitrodienes reactions

Namboothiri and colleagues describe Rauhut-Curier (RC) reactions of aliphatic nitroalkenes and nitrodienes with enones and acrylates.

It has received very positive comments from the referees and the Editorial Office. What do you think?

As a HOT article, it will be free to access until September 26th.

Rauhut–Currier type homo- and heterocouplings involving nitroalkenes and nitrodienes
Pramod Shanbhag, Pradeep R. Nareddy, Mamta Dadwal, Shaikh M. Mobin and Irishi N. N. Namboothiri
Org. Biomol. Chem., 2010, Advance Article
DOI: 10.1039/C0OB00062K , Paper

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OBC Issue 18 Cover: Organocatalysis and aqueous aldol reactions

Thomas Nugent and co-workers talk about the top organocatalysts for cyclic ketones and discover a 2-picolylamine template which is a promising new organocatalyst for aqueous aldol reactions.

Do you want to read more? You can do it for free until early October here!

Picolylamine as an organocatalyst template for highly diastereo- and enantioselective aqueous aldol reactions
Thomas C. Nugent, M. Naveed Umar and Ahtaram Bibi
Org. Biomol. Chem., 2010, 8, 4085-4089
DOI: 10.1039/C0OB00049C

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