A Novel Assay for Studying DNA Repair

A novel DNAzyme-based colorimetric assay for the detection of hOGG1 activity with lambda exonuclease cleavage

Yu et al., Anal. Methods, 2013, Advance Article

Mutation, apoptosis and cancer can develop from damaged DNA, however the cell produces proteins capable of repairing DNA to prevent these dangerous effects. One of these proteins produced by cells, 8-oxoG DNA glycosylase/AP lyase (hOGG1), targets DNA lesions caused by reactive oxygen species. Typically studying this glycosylase requires large instrumentation, such as HPLC, or radioactive labeling. Ru-Qin Yu and coworkers at Hunan University developed a system, where the hOGG1 cleaves at the mismatch site on a DNA strand, and releases a DNAzyme mimetic, which produces a colored signal. This rapid and sensitive colorimetric assay measured the activity of hOGG1 for a range of concentrations, with an affordable DNA probe, and user-friendly instrumentation.

This paper will be free to read until Nov 30th.

A novel DNAzyme-based colorimetric assay for the detection of hOGG1 activity with lambda exonuclease cleavage
Shu-Cheng Liu, Hui-Wang Wu, Jian-hui Jiang, Guo-Li Shen and Ru-Qin Yu
Anal. Methods, 2013, Advance Article
DOI: 10.1039/C2AY26018B

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HOT articles in Analytical Methods this October

Analytical Methods, Oustide front cover, Issue 10, 2012Take a look below at some wonderful HOT articles we’ve recently published this month in Analytical Methods. There are papers covering a large variety of fields, including the analysis of cosmetics, semivolatiles in drinking water, microarrays, and refrigerant systems. These HOT papers will be free to read until November 19th.

Preparation of aligned porous silica monolithic capillary columns and their evaluation for HPLC
Adham Ahmed, Peter Myers and Haifei Zhang
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25671A

Fabricating three-dimensional hydrogel oligonucleotide microarrays to detect single nucleotide polymorphisms
Xia Liu, Tao Li, Dianjun Liu and Zhenxin Wang
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25904D

Measurement of iodide and caffeine content in cellulite reduction cosmetic products sold in the European market
Emilia Marchei, Daniela De Orsi, Carmine Guarino, Stefano Dorato, Roberta Pacifici and Simona Pichini
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25761K

A novel outlook on detecting microbial contamination in cosmetic products: analysis of biomarker volatile compounds by solid-phase microextraction gas chromatography-mass spectrometry
Gerardo Alvarez-Rivera, Trinidad De Miguel, Maria Llompart, Carmen Garcia-Jares, Tomas Gonzalez Villa and Marta Lores
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25833A

Analytical Methods, Inside front cover, Issue 10, 2012Development of EPA Method 525.3 for the analysis of semivolatiles in drinking water
Paul E. Grimmett and Jean W. Munch
Anal. Methods, 2013, Advance Article
DOI: 10.1039/C2AY25880C

Determination of the Raman depolarization ratio in optically active samples
Johannes Kiefer and Malte Kaspereit
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25987G

A compact comprehensive two-dimensional gas chromatography (GC×GC) approach for the analysis of biogenic VOCs
Samuel J. Edwards, Alastair C. Lewis, Stephen J. Andrews, Richard T. Lidster, Jacqueline F. Hamilton and Christopher N. Rhodes
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25710F

A sensor probe for the continuous in situ monitoring of ammonia leakage in secondary refrigerant systems
Raman Subramanian, Karl Crowley, Aoife Morrin and Anthony J. Killard
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25688F

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Metals in health & nutrition

Vitamin pills with different metals indicated on eachMetals play an important role in human health and nutrition. Some, such as zinc, copper and iron have vital roles within the body and therefore regular intake is essential. However, an excess of these metals, or consumption of metal contaminants such as cadmium or arsenic, can have significant detrimental effects on our health.

The collection of articles below encompasses all aspects of metals in health from their dietary sources and quantitative analysis to the impact these metals can have on our health. Enjoy these articles from Analytical Methods, Food & Function and Metallomics for free*

Click here for the full list of articles

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What’s HOT in Issue 11?

Outside front cover, Anal. Methods, 2012, Issue 11We have a bumper crop of HOT articles in this issue of Analytical Methods. Take a look at some of the hot science that we have published in this month’s issue. These papers will be free to read until Nov 9th.

XPS investigation of a Si-diode in operation
Sefik Suzer
Anal. Methods, 2012, 4, 3527-3530
DOI: 10.1039/C2AY25901J

Using gallic acid-modified gold nanoassemblies to detect the Pb2+ of tea
Caiyun Jiang, Meihua Ma and Yuping Wang
Anal. Methods, 2012, 4, 3570-3574
DOI: 10.1039/C2AY25648G

Reagentless amperometric immunosensor for α-1-fetoprotein based on assembly of nano-Au@SiO2 composite
Xiaomei Huang, Xiang Deng and Di Wu
Anal. Methods, 2012, 4, 3575-3579
DOI: 10.1039/C2AY25778E

Electrochemical sensing platform based on Schiff-base cobalt(II)/single-walled carbon nanohorns complexes system
Baoping Lu, Zhe Zhang, Jinhui Hao, Guobao Xu, Bailin Zhang and Jilin Tang
Anal. Methods, 2012, 4, 3580-3585
DOI: 10.1039/C2AY25940K

Inside front cover, Anal. Methods, 2012, Issue 11Simultaneous determination of Pb(II) and Cd(II) using an electrode modified with electropolymerized thiadiazole film
Changzhi Zhao, Hui Liu and Li Wang
Anal. Methods, 2012, 4, 3586-3592
DOI: 10.1039/C2AY25525A

The preparation and use of synthetic isotope mixtures for testing the accuracy of the PTIMS method for 10B/11B isotope ratio determination using boron mannitol complex and NaCl for the formation of Na2BO2+
Radhika M. Rao, Ankush R. Parab and Suresh Kumar Aggarwal
Anal. Methods, 2012, 4, 3593-3599
DOI: 10.1039/C2AY25439E

A new matrix of MALDI-TOF MS for the analysis of thiolate-protected gold clusters
Haruki Kouchi, Hideya Kawasaki and Ryuichi Arakawa
Anal. Methods, 2012, 4, 3600-3603
DOI: 10.1039/C2AY26013A

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Analytical Methods Issue 11 now online

The latest issue of Analytical Methods has just hit the web, and we have 4 fantastic covers, all from HOT articles, for you to take a look at.

Intact triacylglycerol profiles of fats and meats via thermal imprinting easy ambient sonic-spray ionization mass spectrometry

Eberlin, Visentainer et al, Anal. Methods, 2012, 4, 3551

On the outside front cover we have an image from Marcos Eberlin, Jesui Visentainer and colleagues from Brazil who have been working on profiling fats and meats using easy ambient sonic-spray ionization mass spectrometry in an effort to monitor quality control.

Intact triacylglycerol profiles of fats and meats via thermal imprinting easy ambient sonic-spray ionization mass spectrometry
Andréia M. Porcari, Nicolas V. Schwab, Rosana M. Alberici, Elaine C. Cabral, Damila R. de Moraes, Paula F. Montanher, Christina R. Ferreira, Marcos N. Eberlin and Jesuí V. Visentainer
Anal. Methods, 2012, 4, 3551-3557
DOI: 10.1039/C2AY25550B

Determination of benzyl methyl ketone – a commonly used precursor in amphetamine manufacture

D'Auria et al., Anal. Methods, 2012, 4, 3558

From Sabato D’Auria and colleagues in Italy comes a piece of artwork from their research into an assay that can detect benzyl methyl ketone, which is often used as a precursor in making amphetamine.

Determination of benzyl methyl ketone – a commonly used precursor in amphetamine manufacture
Stefano Di Giovanni, Antonio Varriale, Vincenzo Manuel Marzullo, Giuseppe Ruggiero, Maria Staiano, Alberto Secchi, Luigi Pierno, Anna Maria Fiorello and Sabato D’Auria
Anal. Methods, 2012, 4, 3558-3564
DOI: 10.1039/C2AY25772F

Improvement in accuracy and specificity of high-throughput sialic acid assay

Prajapati et al., Anal. Methods, 2012, 4, 3565

On the inside back cover, we showcase research into high-throughput sialic acid assays by Shashi Prajapati and colleagues from the Cell Culture Development – High-Throughput Analytical Group, Biogen Idec Inc, Cambridge, MA, USA.

Improvement in accuracy and specificity of high-throughput sialic acid assay
Lam Raga A. Markely, Kanvasri N. Jonnalagadda, Martin Sinacore, Thomas Ryll and Shashi Prajapati
Anal. Methods, 2012, 4, 3565-3569
DOI: 10.1039/C2AY25448D

Silicon oxynitride microspheres as stationary phase for high performance liquid chromatography

Liang et al., Anal. Methods, 2012, 4, 3524

We showcase research on the outside back cover into HPLC stationary phases by Xinmiao Liang and colleagues from the Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, China.

Silicon oxynitride microspheres as stationary phase for high performance liquid chromatography
Huihui Wan, Xingya Xue, Yuguang Du and Xinmiao Liang
Anal. Methods, 2012, 4, 3524-3526
DOI: 10.1039/C2AY25783A

All of these cover articles will be free to read for 6 weeks.

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Mustard plant can hold nerve agent secrets

UK scientists have shown that plants can be used to detect nerve agents.

Nerve agents such as the acetylcholinesterase inhibitor, VX (O-ethyl S-[2-(diisopropylamino)ethyl] methylphosphonothioate), are extremely toxic substances banned by the Chemical Weapons Convention. Unfortunately, they can still be used to terrifying effect in the wrong hands, with one example being the sarin attacks in the Tokyo Metro in 1995.

The V nerve agents, of which VX is the most famous, was discovered by accident during work on organophosphate pesticides

The V nerve agents, of which VX is the most famous, was discovered by accident during work on organophosphate pesticides

To read the full article please visit Chemistry World

Detection of the organophosphorus nerve agent VX and its hydrolysis products in white mustard plants grown in contaminated soil
Matthew R. Gravett,  Farrha B. Hopkins,  Marcus J. Main,  Adam J. Self,  Christopher M. Timperley,  Andrew J. Webb and Matthew J. Baker
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25883H

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Top ten most accessed articles in September

This month sees the following articles in Analytical Methods that are in the top ten most accessed:-

Quality control of routine sampling in chemical analysis
Analytical Methods Committee
Anal. Methods, 2012,4, 1482-1483 DOI: 10.1039/C2AY90022J

Diagnostic segregation of human brain tumours using Fourier-transform infrared and/or Raman spectroscopy coupled with discriminant analysis
Ketan Gajjar ,  Lara D. Heppenstall ,  Weiyi Pang ,  Katherine M. Ashton ,  Júlio Trevisan ,  Imran I. Patel ,  Valon Llabjani ,  Helen F. Stringfellow ,  Pierre L. Martin-Hirsch ,  Timothy Dawson and Francis L. Martin
Anal. Methods, 2012, Advance Article DOI: 10.1039/C2AY25544H

Dark uncertainty
Analytical Methods Committee
Anal. Methods, 2012,4, 2609-2612 DOI: 10.1039/C2AY90034C

Bayesian statistics in action
Analytical Methods Committee
Anal. Methods, 2012,4, 2213-2214 DOI: 10.1039/C2AY90023H

Application of magnetic molecularly imprinted polymers in analytical chemistry
Ligang Chen and Bin Li
Anal. Methods, 2012,4, 2613-2621 DOI: 10.1039/C2AY25354B

Rapid visual detection of blood cyanide
Christine Männel-Croisé and Felix Zelder
Anal. Methods, 2012,4, 2632-2634 DOI: 10.1039/C2AY25595B

Let there be chip—towards rapid prototyping of microfluidic devices: one-step manufacturing processes
Ansgar Waldbaur ,  Holger Rapp ,  Kerstin Länge and Bastian E. Rapp
Anal. Methods, 2011,3, 2681-2716 DOI: 10.1039/C1AY05253E

On-plate enrichment methods for MALDI-MS analysis in proteomics
Ying Zhang ,  Lulu Li ,  Pengyuan Yang and Haojie Lu
Anal. Methods, 2012,4, 2622-2631 DOI: 10.1039/C2AY25510C

A fast-responding fluorescent turn-on sensor for sensitive and selective detection of sulfite anions
Changmin Yu ,  Ming Luo ,  Fang Zeng and Shuizhu Wu
Anal. Methods, 2012,4, 2638-2640 DOI: 10.1039/C2AY25496D

Electrochemiluminescence based on quantum dots and their analytical application
Haiping Huang ,  Jingjing Li and Jun-Jie Zhu
Anal. Methods, 2011,3, 33-42 DOI: 10.1039/C0AY00608D

Why not take a look at the articles today and blog your thoughts and comments below.

Fancy submitting an article to Analytical Methods? Then why not submit to us today or alternatively email us your suggestions.

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HOT papers in Analytical Methods

Take a look below at some wonderful HOT articles we’ve recently published this month in Analytical Methods. There are papers covering a large variety of methods including XPS, MALDI-TOF MS, Raman spectroscopy and much more. These papers will be free to read until Oct 26th.

Analytical MethodsThe preparation and use of synthetic isotope mixtures for testing the accuracy of the PTIMS method for 10B/11B isotope ratio determination using boron mannitol complex and NaCl for the formation of Na2BO2+
Radhika M. Rao, Ankush R. Parab and Suresh Kumar Aggarwal
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25439E

Diagnostic segregation of human brain tumours using Fourier-transform infrared and/or Raman spectroscopy coupled with discriminant analysis
Ketan Gajjar, Lara D. Heppenstall, Weiyi Pang, Katherine M. Ashton, Júlio Trevisan, Imran I. Patel, Valon Llabjani, Helen F. Stringfellow, Pierre L. Martin-Hirsch, Timothy Dawson and Francis L. Martin
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25544H

Electrochemical sensing platform based on Schiff-base cobalt(II)/single-walled carbon nanohorns complexes system
Baoping Lu, Zhe Zhang, Jinhui Hao, Guobao Xu, Bailin Zhang and Jilin Tang
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25940K

Analytical MethodsDetermination of carbonate ion contents in layered double hydroxides by FTIR spectrometry
Toshiyuki Tanaka, Yoshikazu Kameshima, Shunsuke Nishimoto and Michihiro Miyake
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25850A

A new matrix of MALDI-TOF MS for the analysis of thiolate-protected gold clusters
Haruki Kouchi, Hideya Kawasaki and Ryuichi Arakawa
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY26013A

XPS investigation of a Si-diode in operation
Sefik Suzer
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25901J

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Antibody Based Drug Screening

Laura Ruvuna, Web Writer

Determination of benzyl methyl ketone – a commonly used precursor in amphetamine manufacture

D'Auria et al., Anal. Methods, 2012, Advance Article

Researchers in Italy have developed a new technique for detecting an amphetamine and methamphetamine precursor, 1-phenyl-2-propanone, also known as benzyl methyl ketone (BMK). Catching the precursors in shipment reduces the manufacturing and availability of these dangerous drugs, but it can be difficult as the density is similar to water. Common techniques such as gas chromatography and HPLC, while effective, require large instrumentation with testing performed in the laboratory. Alternatively, Stefano Di Giovanni, Sabato D’Auria and coworkers synthesized a BMK derivative, with the goal of growing antibodies and detecting the resulting fluorescent signal from binding with BMK. Using this system, they have managed to detect down to 100 nM and, are transitioning from large laboratory equipment towards a smaller, portable optical detection device. This article will be free to read until Oct 19th.

Determination of benzyl methyl ketone – a commonly used precursor in amphetamine manufacture
Stefano Di Giovanni, Antonio Varriale, Vincenzo Manuel Marzullo, Giuseppe Ruggiero, Maria Staiano, Alberto Secchi, Luigi Pierno, Anna Maria Fiorello and Sabato D’Auria
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25772F

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Simple, rapid and label-free colorimetric assay for arsenic

Simple, rapid and label-free colorimetric assay for arsenicResearchers from Central South University, Changsha, Hunan and Anyang Normal University, Anyang, Henan, China report a simple, rapid and selective colorimetric visualization of arsenic using unmodified gold nanoparticles (AuNPs) and a phytochelatin-like peptide.

The detection limit shown is 20 nM, which is lower than the World Health Organization’s (WHO) standard for drinking water, and the authors have demonstrated feasibility for the detection of arsenic in groundwater.

They say their method will be valuable for the design of new types of metal ions sensors and will likely lead to many colorimetric detection applications in environmental monitoring.

Simple, rapid and label-free colorimetric assay for arsenic based on unmodified gold nanoparticles and a phytochelatin-like peptide
Ning Xia, Yunfeng Shi, Renchun Zhang, Feng Zhao, Feng Liu and Lin Liu
Anal. Methods, 2012, Advance Article
DOI: 10.1039/C2AY25803J

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