Archive for the ‘Hot articles’ Category

HOT: Stereochemical diversity-oriented strategy for histamine receptor ligands synthesis

In their quest to develop specific ligands for drug target proteins, Professor Satoshi Shuto and coll. have used a stereochemical diversity-oriented conformational restriction strategy to synthesize potent histamine H3 and/or H4 receptor ligands. Some of these cyclopropane-based analogs of histamine with a chiral cis- or trans-2,3-methanobutane backbone show remarkable antagonistic activity towards H3 and H4.




Interested in Medicinal Chemistry and curious about what conformational restriction strategies can do for you?

Then why not read this article, FREE to access for a period of four weeks






Cyclopropane-based stereochemical diversity-oriented conformational restriction strategy: Histamine H3 and/or H4 receptor ligands with the 2,3-methanobutane backbone
Mizuki Watanabe, Takaaki Kobayashi, Takatsugu Hirokawa, Akira Yoshida, Yoshihiko Ito, Shizuo Yamada, Naoki Orimoto, Yasundo Yamasaki, Mitsuhiro Arisawa and Satoshi Shuto
Org. Biomol. Chem., 2012, Advance Article
DOI: 10.1039/C1OB06496G, Paper

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OBC Issue 1 now published!

Welcome to Issue 1 of OBC, 2012!

On the front cover we have an article from Brian Stolz and team on the synthesis of enantioenriched γ-quaternary cycloheptenones, with potential for the preparation of non-natural analogs of cycloheptanoid natural products.

Synthesis of enantioenriched γ-quaternary cycloheptenones using a combined allylic alkylation/Stork–Danheiser approach: preparation of mono-, bi-, and tricyclic systems
Nathan B. Bennett, Allen Y. Hong, Andrew M. Harned and Brian M. Stoltz
DOI: 10.1039/C1OB06189E

On the inside front cover is an article from Robert Stockman and coworkers.  They report the synthesis of an advanced intermediate, an azaspirocyclic aldehyde, in the route to halichlorine developed by Clive and coworkers, shortening the synthetic route by 15 steps.

Combining two-directional synthesis and tandem reactions: a short formal synthesis of halichlorine
Camille Gignoux, Annabella F. Newton, Alexandre Barthelme, William Lewis, Marie-Lyne Alcaraz and Robert A. Stockman
DOI: 10.1039/C1OB06380D

Incredibly 2012 will be our 10th year of publication and we would like to thank all our authors, referees, readers and Board members for their support over the last decade. Read the Editorial introduction to the next volume from Chair Jeffrey Bode and Editor Richard Kelly for the changes we’ve seen and what we have to look forward to in the coming year.

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Blocking cancer’s path

A concise synthesis of the natural product rasfonin could reignite interest in this molecule as a tool to develop cancer drugs, say scientists from the Netherlands.

Adriaan Minnaard and Ben Feringa’s group from the University of Groningen developed the synthesis, which has a higher overall yield and takes fewer steps than previous syntheses, they say.

Rasfonin could be important in cancer research because it inhibits a cell signalling pathway called the RAS pathway. ‘If a cell becomes cancerous, often you see that RAS, the most important protein in the pathway, is mutated,’ explains Minnaard. The mutated RAS keeps on signalling, so the cancer cells keep dividing. Rasfonin blocks the pathway by binding either to RAS or one of the other proteins in the pathway, but it’s not known which one. ‘Scientists would love to have rasfonin to investigate this further, but it takes too much time and effort to make,’ says Minnaard.

In a bid to make synthesis easier, the team has made rasfonin in 30 steps (21 in the longest linear sequence) and in 11 per cent overall yield. ‘It’s quite a lot of steps,’ admits Minnaard, ‘but given the overall yield and the good activity (which means that not so much compound is needed), the synthesis is suitable to prepare any quantity needed for research purposes.’ One main step was introducing the methyl groups in the upper chain of rasfonin using catalytic asymmetric conjugate addition and the other was forming the lower chain, which involved using Feringa butenolide, a building block developed by Feringa. ‘It makes our synthesis much more straightforward than the current two syntheses,’ says Minnaard.

Synthesis of rasfonin

The synthesis of rasfonin was developed using asymmetric conjugate addition and Feringa's butenolide

The first synthesis in 2003 elucidated the stereochemistry and structure of rasfonin, but was not aimed at creating a synthesis for producing large quantities. Masami Ishibashi from Chiba University, Japan, who carried out this synthesis, says that Minnaard and Feringa have achieved a highly stereoselective and efficient synthesis. ‘It may be strongly expected that this new route will accelerate the chemical biology of rasfonin to identify its target protein,’ says Ishibashi.

‘It is a nice piece of work, which highlights some of the asymmetric catalysis methods developed in Professor Feringa’s laboratory,’ adds Robert Boeckman from the University of Rochester, US, who carried out the second synthesis of rasfonin in 2006. Boeckman’s synthesis used chiral auxiliaries. ‘Boeckman changes the substrate in such a way that the stereochemical outcome will be the desired one, but he has to do a lot more steps with the substrates,’says Minnaard. ‘We have our information in the catalyst, which is more efficient.’

Interested? Read Elinor Richards’ full Chemistry World article here or download the OBC paper:

A concise asymmetric synthesis of (−)-rasfonin
Yange Huang, Adriaan J. Minnaard and Ben L. Feringa
Org. Biomol. Chem.
, 2012, Advance Article
DOI: 10.1039/C1OB06700A

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HOT: indolizinones investigated

Alison R. Hardin Narayan and Richmond Sarpong have investigated the fundamental reactivity of indolizinones, relatively unexplored 6,5-N-fused bicycles.  They find that these bicycles have excellent ability to transfer stereochemistry  from the ring fusion position to other stereocenters, as well as readily undergoing Diels-Alder cycloadditions and selective hydrogenation, among other reactions.

To read more on the potential applications of indolizinones download the article now – it’s free to access for the next four weeks:

Indolizinones as synthetic scaffolds: fundamental reactivity and the relay of stereochemical information
Alison R. Hardin Narayan and Richmond Sarpong
DOI: 10.1039/C1OB06423A

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HOT: phosphoramidate d4T derivatives show in vitro anti-HIV activity

Uncovering a new type of phosphoramidite prodrug, Piet Herdewijn et al. at the Katholieke Universiteit Leuven (Belgium) describe the synthesis and biological evaluation of phosphoramidate d4T derivatives against HIV. Some of the newly synthesized compounds were found to act as chain terminators for HIV-1 RT, thus inhibiting HIV-1 replication.

This article has been selected as HOT and will be FREE to access for a period of 4 weeks.
Read all about it here, and let us know what you think:



Synthesis and in vitro enzymatic and antiviral evaluation of phosphoramidate d4T derivatives as chain terminators
Shiqiong Yang, Christophe Pannecouque, Eveline Lescrinier, Anne Giraut and Piet Herdewijn
DOI: 10.1039/C1OB06214J

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HOT: Systematic (chemical) space exploration – a challenge for synthetic chemists

Scaffold diversity of the organic chemistry universe

‘Chemists’ historical exploration of chemical space has been highly uneven and unsystematic’ write Adam Nelson and coworkers.  In this Perspective article they seek to pull together  synthetic strategies that have been designed to allow a more systematic discovery of biologically active small molecules, with particular emphasis on combinatorial strategies.

Areas covered:

  • The “build–couple–pair” approach
  • Ambiphile pairing reactions
  • Folding and branching pathways
  • Oligomer-based approaches to scaffold diversity

This hot article is free to access for the next four weeks – download today to read more on the ‘challenge for synthetic chemists in the twenty-first century’:

Towards the systematic exploration of chemical space
Mark Dow, Martin Fisher, Thomas James, Francesco Marchetti and Adam Nelson
DOI: 10.1039/C1OB06098H

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HOT: Practical utility of silyl-protected dioxaborinanes in rhodium-catalysed 1,4-addition reactions

This Hot Article by Christopher Frost et al. at the University of Bath (UK) describes the utility of novel silyl-protected dioxaborinanes, performing as excellent donors in rhodium-catalysed 1,4-addition reactions under anhydrous conditions. This approach allows the enantioselective addition to arylidene Meldrum’s acid derivatives and a subsequent asymmetric synthesis of 4-arylchroman-2-ones, an important class of bioactive and pharmaceutically-relevant compounds.

Why not read this OBC Communication now! It will be FREE to access for the next four weeks.


Rhodium-catalysed enantioselective synthesis of 4-arylchroman-2-ones
Joseph C. Allen, Gabriele Kociok-Köhn and Christopher G. Frost
Org. Biomol. Chem., 2012, Advance Article
DOI: 10.1039/C1OB06586F, Communication

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HOT: Novel source of acyl anions for intermolecular Stetter reactions

In this Hot Article, Alessandro Massi and colleagues at the University of Ferrara (Italy) disclose a novel approach to the Stetter reaction – the N-heterocyclic carbene (NHC)-catalyzed conjugate addition of acetyl anions to various α,β-unsaturated acceptors – in which 2,3-butandione (biacetyl) is used as an alternative surrogate of acetaldehyde.

We hope this new approach to NHC polarity reversal organocatalysis will catch your interest! You can read the article for FREE for the next 4 weeks.


Thiazolium-catalyzed intermolecular Stetter reaction of linear and cyclic alkyl α-diketones
Olga Bortolini, Giancarlo Fantin, Marco Fogagnolo, Pier Paolo Giovannini, Alessandro Massi and Salvatore Pacifico
Org. Biomol. Chem., 2011, Advance Article
DOI: 10.1039/C1OB06480K, Paper

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HOT: new N-spiro quaternary ammonium salt phase-transfer catalysts from tartaric acid

Mario Waser et al. have designed new N-spiro quaternary ammonium salt-based catalysts from tartaric acid-derived TADDOLs.  The new catalysts catalyse the asymmetric α-alkylation of glycine Schiff bases in good yields and up to 93% ee.

Design, synthesis, and application of tartaric acid derived N-spiro quaternary ammonium salts as chiral phase-transfer catalysts
Mario Waser, Katharina Gratzer, Richard Herchl and Norbert Müller
DOI: 10.1039/C1OB06573D

This article is part of a joint ChemComm & OBC web theme issue on Organocatalysis.

Keep checking this page as further articles are added to the web theme issue.

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HOT: Organocatalytic approach to the enantioselective synthesis of alpha-arylcyclohexenones and derivatives



M. Belén Cid et al. at the Universidad Autonoma de Madrid, Spain, have devised a simple and efficient organocatalytic approach for the synthesis of alpha-aryl cyclohexenones and cyclohexanones, leading to ee up to 96% and complete diastereoselectivity, via a Michael addition and aldol reaction as key steps.

Highly rated by the reviewers and editorial office alike, this Hot Article will be FREE to access for the next 4 weeks.

This article is also part of a joint ChemComm & OBC web theme issue on Organocatalysis.

Keep checking this page as further articles are added to the web theme issue.

An organocatalytic approach to enantiomerically enriched α-arylcyclohexenones and cyclohexanones
Sara Duce, María Jorge, Inés Alonso, José Luis García Ruano and M. Belén Cid
Org. Biomol. Chem., 2011, Advance Article
DOI: 10.1039/C1OB06356A, Paper
From collection Organocatalysis

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