HOT: Using precursor-directed biosynthesis to open new fronts in the battle against cancer

Supplying an organism with modified precursor materials for biosynthesis is a great way of hijacking the synthetic machinery of an organism to make the compounds you want. In this paper Cormac Murphy and colleagues from University College Dublin and Ecole Normale Superieure demonstrate that precursor-directed biosynthesis is a convenient way to create analogs of rumbrin with tunable potency and selectivity, also showing that the 3-chloropyrrole moiety is not absolutely essential for biological activity in this class of polyenes. One of the compounds prepared showed dramatically improved activity against lung cancer cells.

Interested? Read this article in OBC, it is free to access for the next four weeks!

Production of anticancer polyenes through precursor-directed biosynthesis
Benjamin R. Clark, Stephen O’Connor, Deirdre Fox, Jacques Leroy and Cormac D. Murphy
Org. Biomol. Chem., 2011, Advance Article

DOI: 10.1039/C1OB05667K

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Review: Glycoconjugates degradation – the enzymes involved and their probes

Glycoconjugates play a major role in a number of biological processes, for example modulating cellular interactions, and chemical tools have been instrumental in understanding these aspects of the glycosciences.

In this OBC Perspective Herman Overkleeft and co-authors provide an overview of the enzymes involved in the degradation of glycoconjugates, and the activity-based probes that have been used to study these enzymes, along with the advantages and disadvantages of these probes. Addressing all facets of carbohydrate enzymology, the authors identify a number of key areas for future development in the field.

Are you a glycoscientist or a bioorganic chemist? Then this OBC Perspective is for you! Download the article to read the full details:
Irreversible inhibitors and activity-based probes as research tools in chemical glycobiology
Martin D. Witte, Gijsbert A. van der Marel, Johannes M. F. G. Aerts and Herman S. Overkleeft
Org. Biomol. Chem., 2011, Advance Article
DOI: 10.1039/C1OB05531C, Perspective

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HOT: Novel drugs fight back against MRSA

The enormous success of antibiotics is seriously threatened by the development of resistance to many drugs available on the market. So the search for new antibiotics that are less prone to resistance is on.

Antimicrobial peptides (AMPs) are a possible solution that has attracted considerable attention but they have some drawbacks including high cost of manufacturing. Now Steven Firestine and colleagues at Wayne State University in the US have examined the potential of a new class of benzophenone-based membrane targeted antibiotics (BPMTAs).

Firestine shows that these agents release potassium ions from treated bacteria which  results in disruption of the bacterial membrane potential. This membrane-targeted disruption means that BPMTAs have excellent activity against antibiotic-resistant strains like MRSA and VRSA.

Structures of novel membrane-targeted antibiotics.

The team have demonstrated the promising potential of these agents by using them to cure mice of a lethal MRSA infection. They were also unable to develop a mutant resistant to the agents.

Interested? Read the article in OBC that is free to access for the next four weeks!

Examination of a synthetic benzophenone membrane-targeted antibiotic
Sunil K. Vooturi, Mahender B. Dewal and Steven M. Firestine
Org. Biomol. Chem., 2011, DOI: 10.1039/C1OB05643C

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RCM synthesis of amphidinolactone A core on the cover of Issue 16

On the front cover of this issue is work from Debendra Mohapatra at the Indian Institute of Chemical Technology, together with colleagues at Hyderabad University and King Saud University on the ring-closing metathesis based synthesis of the macrolactone core of amphidinolactone A.

The convergent synthesis achieved the macrolactone core in 32% yield and demonstrated the steric hinderance resulting from protecting groups in the RCM reaction.  PMB (p-methoxybenzyl ether) protecting groups on the macrolactonization precursor prevented the RCM reaction from proceeding, but  simple de-protection to the subsequent diol achieved the 13-membered lactone ring system present in amphidinolactone A in 76% yield.  Further work to incorporate the the RCM reaction into the total synthesis of amphidinolactone A is ongoing.

Ring-closing metathesis (RCM) based synthesis of the macrolactone core of amphidinolactone A
Debendra K. Mohapatra, Manas R. Pattanayak, Pragna P. Das, Tapas R. Pradhan and J. S. Yadav
Org. Biomol. Chem., 2011,
DOI: 10.1039/C1OB05335C

View the rest of the articles in Issue 16

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HOT: vinylogous Mukaiyama-Michael reaction for synthesis of γ-subsituted butenolides

The butenolide skeleton is one of the more common to natural products and bioative compounds, thus its synthesis has afforded much attention from synthetic chemists in recent years.  Here, Xiamong Feng and colleagues from the Key Laboratory of Green Chemistry and Technology at Sichuan University have devised a simple route that affords the desired γ-butenolide compounds in high yields with high levels of selectivity.

By using a chiral N,N‘-dioxide-scandium catalyst in an asymmetric vinylogous Mukaiyama–Michael reaction they were able to form highly functionalized chiral γ-substituted butenolides with broad substrate scope, with up to 92% ee.  The pathway is air stable and produces product on a gram scale.

For the full details download the article – it’s free to access for the next four weeks:

Highly enantioselective synthesis of γ-substituted butenolides via the vinylogous Mukaiyama–Michael reaction catalyzed by a chiral scandium(III)–N,N′-dioxide complex
Qi Zhang, Xiao Xiao, Lili Lin, Xiaohua Liu and Xiaoming Feng
Org. Biomol. Chem., 2011, Advance Article
DOI: 10.1039/C1OB05558E

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Hot: New tools to fight HIV

New potentially useful therapeutic tools for the sexually transmitted HIV infection have been identified by Anna Bernardi at the University of Milan, Franck Fieschi and colleagues in France, Spain and Italy.

DC-SIGN and Langerin are two C-type lectins involved in the initial steps of HIV infection: the former acts as a viral attachment factor and facilitates viral invasion of the immune system, while the latter has a protective effect. Bernardi and Fieschi have successful synthesised potential antiviral compounds targeted against DC-SIGN using a common fucosylamide anchor.

Their DC-SIGN affinity was found to be similar to that of the natural ligand Lewis-X (LeX). The compounds were also found to be selective for DC-SIGN and to interact only weakly with Langerin. All these results point to the potential for these molecules to be used as therapeutic tools to fight the disease.

This hot piece of synthesis is currently free to access for four weeks:

Second generation of fucose-based DC-SIGN ligands : affinity improvement and specificity versus Langerin
Manuel Andreini, Daniela Doknic, Ieva Sutkeviciute, José J. Reina, Janxin Duan, Eric Chabrol, Michel Thepaut, Elisabetta Moroni, Fabio Doro, Laura Belvisi, Joerg Weiser, Javier Rojo, Franck Fieschi and Anna Bernardi
Org. Biomol. Chem., 2011, DOI: 10.1039/C1OB05573A,

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Multicomponent reactions and click chemistry on the cover of Issue 15

Work from Asish K. Bhattacharya (National Chemical Laboratory, India) and co-workers features on the front cover of Issue 15.  Their paper describes the FeCl3 catalysed four-component condensation of diamines, acetone and phosphites in the presence of molecular sieves to yield benzodiazepinyl phosphonates which demonstrate protease inhibition activity against clostripain.

An efficient synthesis of benzodiazepinyl phosphonates as clostripain inhibitors via FeCl3 catalyzed four-component reaction
Asish K. Bhattacharya, Kalpeshkumar C. Rana, Dnyaneshwar S. Raut, Vaibhav P. Mhaindarkar and Mohamad I. Khan
Org. Biomol. Chem.
, 2011, 9, 5407-5413
DOI: 10.1039/C0OB01102A

On the inside front cover we have work from Boris Vauzeilles (CNRS) et al. on the synthesis of neoglycoconjugates as glycosidase inhibitors through click connection of the iminosugar deoxynojirimycin and functionalised adamantanes.

Selection of the biological activity of DNJ neoglycoconjugates through click length variation of the side chain
Nicolas Ardes-Guisot, Dominic S. Alonzi, Gabriele Reinkensmeier, Terry D. Butters, Caroline Norez, Frédéric Becq, Yousuke Shimada, Shinpei Nakagawa, Atsushi Kato, Yves Blériot, Matthieu Sollogoub and Boris Vauzeilles
Org. Biomol. Chem., 2011, 9, 5373-5388
DOI: 10.1039/C1OB05119A

Both articles are free to access for 6 weeks, so why not take a look? You can also view the rest of the issue online here

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HOT: carbene catalysis to make courmarin derivatives

A new nucleophilic heterocyclic carbene mediated transformation of 2H-chromene-3-carboxaldehydes has been reported by Vijay Nair, CSIR, et al.

The team were attempting to make endocyclic homoenolates from 2H-chromene-3-carboxaldehyde, but instead discovered a novel transformation which resulted in 3-methyl coumarin.  Coumarins have demonstrated important bioactives and therefore the group envisage that this reaction may be a useful future route to coumarin derivatives.

This hot piece of synthesis is currently free to access for four weeks:

A novel NHC-catalyzed transformation of 2H-chromene-3-carboxaldehydes to 3-methyl-2H-chromen-2-ones
Vijay Nair, C. R. Sinu, R. Rejithamol, K. C. Seetha Lakshmi and Eringathodi Suresh
Org. Biomol. Chem., 2011, Advance Article
DOI: 10.1039/C1OB05325F

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Organocatalysis – announcing a joint ChemComm–OBC web theme

We are delighted to announce a forthcoming ChemCommOrganic & Biomolecular Chemistry (OBC) web themed issue:

Organocatalysis

Guest editors: Keiji Maruoka (Kyoto University), Hisashi Yamamoto (University of Chicago), Liu-Zhu Gong (University of Science and Technology of China) and Benjamin List (Max-Planck-Institut für Kohlenforschung)

Submission deadline: 29th February 2012


We are now inviting submissions for this web theme, which will be a celebration of current achievements and future perspectives in this exciting field of research.

ChemComm and OBC are both welcoming urgent communications; OBC also welcomes full papers. Please feel free to submit to either or both journals.

All manuscripts will undergo strict peer review and should be very important and conceptually significant in accord with the ChemComm and OBC mandates.

Publication of the peer-reviewed articles will occur without delay to ensure the timely dissemination of the work. The articles will then be assembled on the RSC Publishing Platform as a web-based thematic issue, to permit readers to consult and download individual contributions from the entire series.

Communications for this web theme can be submitted anytime from now until 29th February using ChemComm’s and OBC’s web submission system. Please add the phrase ‘organocatalysis web theme‘ in the comments to the editor field.

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On the cover: a mild route to [2.2]paracyclophanes

On the cover of Issue 14 is work from Dario Pasini and colleagues at the University of Pavia.  They have designed a new route to the synthetically challenging cyclophane, [2.2]cyclophanediene.   By using a Pummerer rearrangement of the [3.3]dithiacyclophane starting material, followed by sulfur extrusion the group were able to demonstrate the applicability of this mild and high yielding route.

For the full details download the article – it’s free to access for 6 weeks:

Mild preparation of functionalized [2.2]paracyclophanes via the Pummerer rearrangement
Matteo Montanari, Alberto Bugana, Arvind K. Sharma and Dario Pasini
Org. Biomol. Chem., 2011, 9, 5018-5020
DOI: 10.1039/C1OB05319A

View the issue here

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