Author Archive

Multi-hydrogen-bond cooperation to access chiral 2-amino-3-nitrile-chromenes

In this HOT communication Jian Wang and colleagues at National University of Singapore report an efficient method to construct enantiomeric 2-amino-3-nitrile-chromenes through 2-iminochromenes and malonates. Using a thiourea catalyst Wang et al. rapidly construct the 2-amino-3-nitrile-chromene complexes via a multi-hydrogen-bond cooperative activation model.

For the details of their study download the communication today; it’s free to access for 4 weeks.

Organocatalytic conjugate addition promoted by multi-hydrogen-bond cooperation: access to chiral 2-amino-3-nitrile-chromenes
Wenjun Li, Jiayao Huang and Jian Wang
DOI: 10.1039/C2OB27102H

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Organic & Biomolecular Chemistry issue 2, 2013 featuring: asymmetric phase-transfer catalysis & ion channel inhibitors

Welcome to the second issue of Organic & Biomolecular Chemistry of 2013. In this issue we have: 3 perspectives, 4 communications and 15 articles.

Featuring on the front cover this week is the paper of Keiji Maruoka et al. who report the catalytic asymmetric synthesis of a wide variety of cyclic amino acid derivatives using chiral phase transfer catalysts.

Stereoselective synthesis of cyclic amino acids via asymmetric phase-transfer catalytic alkylation
Taichi Kano, Takeshi Kumano, Ryu Sakamoto and Keiji Maruoka
DOI: 10.1039/C2OB26778K

Taking us under the sea on the inside cover is the work of Tushar Kanti Chakraborty et al. who have developed a convergent method, involving Julia–Kocienski olefination, Urpi acetal aldol and Shiina macrolactonization as the key steps, for the total synthesis of the potent ion channel inhibitor (29S,37S)-isomer of malevamide E.

Total synthesis of (29S,37S)-isomer of malevamide E, a potent ion-channel inhibitor
Praveen Kumar Gajula, Shrikant Sharma, Ravi Sankar Ampapathi and Tushar Kanti Chakraborty
DOI: 10.1039/C2OB26533H

Both of these articles will be free to access for 6 weeks. Read all this in issue 2 of OBC today.

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Cyclodextrin-surfactant complexes: a chain length balancing act

Cyclodextrins are macrocyclic oligomers of α-D-glucose. Their interaction with guest molecules is largely driven by the hydrophobic effect (the expulsion of water from the lipophilic cavity, into bulk, is entropically favourable).

In this HOT paper Cepeda and co-workers explore the solution phase behaviour of β-cyclodextrin/alkyltrimethylammonium bromide mixtures, varying the surfactant alkyl chain length from hexyl (C6) to octadecyl (C18).

Cepeda et al. employ the solvolysis of methoxybenzenesulfonyl chloride (MBSC) as a UV ‘handle’ to monitor the interaction between β-cyclodextrin and surfactant guests. In the presence of aggregated cationic surfactants, MBSC hydrolysis is hindered, owing to the reduced polarity of the micelle interior. MBSC solvolysis can be used to monitor the integrity of surfactant micelles and to calculate the concentration of unbound cyclodextrin.

In the presence of aggregated surfactants Cepeda et al. detect a significant concentration of ‘free’ β-cyclodextrin; the highest of which with decyl (C10) and dodecyl (C12) surfactants. This reflects the balance between the hydrophobic effect (smaller surfactant chains displace less water from the cyclodextrin cavity) and surfactant self-assembly (longer surfactant chains favour micelle formation).  The new model created to describe these interactions will aid the further development of commercial applications for these systems.

Competition between surfactant micellization and complexation by cyclodextrin
M. Cepeda, R. Daviña, L. García-Río, M. Parajó, P. Rodríguez-Dafonte and M. Pessêgo
DOI: 10.1039/C2OB26318A

Published on behalf of Steve Moore, Organic & Biomolecular Chemistry web science writer.

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OBC Issue 1, 2013 – featuring DNA–peptide energetic studies & prodigiosenes to treat leukemia

Welcome to issue 1, 2013, of Organic & Biomolecular Chemistry. The entire issue is free for you to access so get busy downloading!

Front cover: This very elegant cover highlights the work of Leung Sheh and co-workers. The study of Sheh et al. further explores the allosteric features of DNA–peptide molecular recognition with regard to interaction networks, choosing designed peptides that exhibit significant cooperativity in binding to DNA.

Energetic studies on DNA–peptide interaction in relation to the enthalpy–entropy compensation paradox
Robin C. K. Yang, Jonathan T. B. Huang, Shih-Chuan Chien, Roy Huang, Kee-Ching G. Jeng, Yen-Chung Chen, Mokai Liao, Jia-Rong Wu, Wei-Kang Hung, Chia-Chun Hung, Yu-Ling Chen, Michael J. Waring and Leung Sheh

Inside cover: Featuring on this cover is the work of Alison Thompson and co-workers who have structurally modified the C-ring of a series of prodigiosenes to produce a series of analogues that show promising activity against leukemia cell lines.

Investigations regarding the utility of prodigiosenes to treat leukemia
Deborah A. Smithen, A. Michael Forrester, Dale P. Corkery, Graham Dellaire, Julie Colpitts, Sherri A. McFarland, Jason N. Berman and Alison Thompson


Both of these papers have been highlighted by the reviewers as being HOT.

Also in this issue:

HOTPd-catalyzed Suzuki coupling reaction of chloroalkylidene-β-lactones with LB-Phos as the ligand
Pengbin Li, Bo Lü, Chunling Fu and Shengming Ma

HOT An efficient organocatalytic enantioselective synthesis of spironitrocyclopropanes
Utpal Das, Yi-Ling Tsai and Wenwei Lin

HOT Synthesis of a four-component [3]catenane using three distinct noncovalent interactions
Miguel Á. Alemán García and Nick Bampos

Find all this great FREE content and more in issue 1

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One for all and all for one: shape-shifting organic molecules that spontaneously resolve

Researchers in Switzerland have discovered a fluxional molecule that dynamically resolves to a single metastable structural isomer.

Bullvalene is an intriguing molecule. A small polycycle with 10 carbons and 10 hydrogens, and an unusual property: it has no permanent chemical structure.

Its bonds are constantly rearranging through a seemingly endless series of Cope rearrangements. It’s estimated that there are over 1.2 million possible valence tautomers, and due to the rapidity of the conversions, all carbons and protons appear as equivalent on the NMR timescale.

Professor Jeff Bode and his group at ETH Zürich have an interest in these fluxional molecules and their potential uses as chemical sensors.

During a recent investigation into the racemisation of oligo-substituted members of the bullvalene family, they noticed some interesting behaviour in a sample of a tetrasubstituted bullvalene. A single isomer was spontaneously forming, and could be isolated from the mixture. This isomer was surprisingly stable, with a half-life of just over 4 hours at room temperature.

Now, tetrasubstituted bullvalenes have 1680 possible structural isomers and previous work has shown that the mixture is fully dynamic, so the appearance of just one isomer above all the others is pretty remarkable.

Their latest HOT PAPER builds on these results, and seeks to provide further information about the nature of this fascinating molecule.

Expand this blog to read more…

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Suzuki coupling reactions of chloroalkylidene-β-lactones

Thanks to developments in new phosphine ligands the area of C–Cl bond activation has made a lot of progress.

In this paper Shengming Ma and colleagues at Zhejiang University report recent results of the Suzuki coupling reaction of optically active α-chloroalkylidene-β-lactones derivatives using a LB-Phos ligand previously developed by the group. Using this method Ma et al. have prepared a series of optically active α-alkylidene-β-lactones in high ee.

Do you think that this protocol is a versatile method for the organic community to utilise? Read the paper today and let us know by leaving your comments on this blog.

Pd-catalyzed Suzuki coupling reaction of chloroalkylidene-β-lactones with LB-Phos as the ligand
Pengbin Li, Bo Lü, Chunling Fu and Shengming Ma
DOI: 10.1039/C2OB26365C

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Efficient organocatalytic enantioselective synthesis of spironitrocyclopropanes

Researchers from Taiwan have developed an efficient organocatalytic enantioselective synthesis of spironitrocyclopropanes.

In this HOT communication Wenwei Lin and co-workers from National Taiwan Normal University describe the development of an efficient asymmetric pathway for the preparation of spironitrocyclopropanes from 2-arylidene-1,3-indandiones and bromonitroalkanes, catalysed by cinchona-derived bifunctional organocatalysts.

Lin et al. report reaction conditions which allow almost perfect diastereocontrol as well as outstanding enantiocontrol. As nitrocyclopropanes are found in various biologically active natural products and important precursors of bio-relevant cyclopropylamines this new method fills a real synthetic need.

Want to know more? Read the communication for free now! And it will remain free for the next 4 weeks.

An efficient organocatalytic enantioselective synthesis of spironitrocyclopropanes
Utpal Das, Yi-Ling Tsai and Wenwei Lin
DOI: 10.1039/C2OB26943K

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Four-component [3]catenanes using three distinct noncovalent interactions

Chemists from University of Cambridge, UK, have constructed a new class of multicomponent [2] and [3]catenanes utilizing up to four building blocks and three orthogonal interactions.

A major challenge in supramolecular chemistry is being able to harness several orthogonal weak interactions to generate structures with a similar complexity and functionality to those found in nature. This is because, as the variety of the building blocks and noncovalent interactions involved, control over the final structure becomes exponentially more difficult.

In this HOT Communication Miguel Á. Alemán García and Nick Bampos report a one-pot synthesis which uses multiple supramolecular components with distinctly different sets of noncovalent interactions to construct heteroleptic interlocked supramolecular metallomacrocycles.

This Communication is free to access for the next 4 weeks!

Synthesis of a four-component [3]catenane using three distinct noncovalent interactions
Miguel Á. Alemán García and Nick Bampos
DOI: 10.1039/C2OB26587G

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OBC Issue 48 online now; it’s the last one of 2012!

Issue 48 of OBC is now online; the last issue of 2012!

Front cover:
Anyone for a game of dominos? In this paper Alessandro Volonterio and colleagues report a one-pot, three-component sequential procedure for the synthesis of diversely 1,3,5- and 1,3,5,5-substituted hydantoins. Volonterio et al. believe that this methodology is especially convenient for the synthesis of spiro-hydantoins, which are particularly interesting bioactive compounds in medicinal chemistry.

Regioselective multicomponent sequential synthesis of hydantoins
Francesca Olimpieri, Maria Cristina Bellucci, Tommaso Marcelli and Alessandro Volonterio
DOI: 10.1039/C2OB26498F

Inside cover:
This colourful cover highlights the work of Atul Goel & Gerhard Bringmann et al., who report a short and efficient synthesis of racemic cis-pterocarpans and highlight a new protocol for the resolution of the enantiomers on a chiral phase through analytical and preparative HPLC.

Synthesis, optical resolution, absolute configuration, and osteogenic activity of cis-pterocarpans
Atul Goel, Amit Kumar, Yasmin Hemberger, Ashutosh Raghuvanshi, Ram Jeet, Govind Tiwari, Michael Knauer, Jyoti Kureel, Anuj K. Singh, Abnish Gautam, Ritu Trivedi, Divya Singh and Gerhard Bringmann
DOI: 10.1039/C2OB25722J

Download both cover articles for free for 6 weeks!

Also in this issue:

HOT article – 1,5-(H, RO, RS) shift/6π-electrocyclic ring closure tandem processes on N-[(α-heterosubstituted)-2-tolyl]ketenimines: a case study of relative migratory aptitudes and activating effects

Get all of this and more today! Go to the issue now…..

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OBC issue 47 – genomics driven discoveries and click reactions in preotein chemistry

Welcome to issue 47 of Organic & Biomolecular Chemistry. So what have we got in store for you this week?

On the front cover:
In this paper by Martin F. Kreutzer and Markus Nett from the Leibniz Institute for Natural Product Research and Infection Biology, report the bioinformatic analysis of an orphan nonribosomal peptide synthetase gene cluster in the rhizobium Cupriavidus taiwanensis. This genome mining strategy led to the isolation of the associated metabolite; a previously unrecognised lipopeptide siderophore.

Genomics-driven discovery of taiwachelin, a lipopeptide siderophore from Cupriavidus taiwanensis
Martin F. Kreutzer and Markus Nett
DOI: 10.1039/C2OB26296G

On the inside cover:
This attractive image highlights the perspective of Jose M. Palomo who describes the current application of click reactions in protein chemistry, the creation of new semisynthetic enzymes by site-specific modifications and the recent design and creation of enzymes with synthetic click activities.

Click reactions in protein chemistry: from the preparation of semisynthetic enzymes to new click enzymes
Jose M. Palomo
DOI: 10.1039/C2OB26409A


Also in this issue is this HOT Communication:

Benzimidazolium-based synthetic chloride and calcium transporters in bacterial membranes
Claude-Rosny Elie, Audrey Hébert, Mathieu Charbonneau, Adam Haiun and Andreea R. Schmitzer

Read the issue today! The cover articles are free to access for 6 weeks and the HOT article is free for 4 weeks.

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