Author Archive

HOT: The Rabe amination after a century: direct addition of N-heterocycles to carbonyl compounds

This Communication by Marco Bella et al. is a study of the historically famous Rabe amination, presenting preliminary results for a “modern” organocatalytic version of the reaction whereby direct functionalisation of ketones and aldehydes with N-chloro amines is achieved in mild conditions. Bella et al. also report that when aldehydes bearing a CH2 moiety in the α-position are used, a novel rearrangement is observed leading to α-amino ketones.

Have a look at the Communication for more details on the experimental procedure and possible mechanistic explanation for this interesting reaction, it’s free to access for 4 weeks!

The Rabe amination after a century: direct addition of N-heterocycles to carbonyl compounds

Daniele M. Scarpino Schietroma, Mattia R. Monaco, Valerio Bucalossi, Philipp E. Walte, Patrizia Gentili and Marco Bella
DOI: 10.1039/C2OB25595B

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The best of bioorganic from Organic & Biomolecular Chemistry

Continuing with our countdown to OBC’s 10th anniversary celebratory issue we’ve collected a selection of our most cited articles from the area of bioorganic chemistry and made them free to access for one week.


DNA-programmed assembly of nanostructures
Kurt V. Gothelf and Thomas H. LaBean
DOI: 10.1039/B510551J

Nucleic acid nanotechnology—towards Ångström-scale engineering
Jesper Wengel
DOI: 10.1039/B313986G

Fluorescent DNA base replacements: reporters and sensors for biological systems
James N. Wilson and Eric T. Kool
DOI: 10.1039/B612284C

Photochemical control of biological processes
Douglas D. Young and Alexander Deiters
DOI: 10.1039/B616410M

DNA meets synthetic polymers—highly versatile hybrid materials
Fikri E. Alemdaroglu and Andreas Herrmann
DOI: 10.1039/B617941J

DNA-based machines
Moritz K. Beissenhirtz and Itamar Willner
DOI: 10.1039/B607033G

Electrontransfer through DNA and metal-containing DNA
Thomas Carell, Christoph Behrens and Johannes Gierlich
DOI: 10.1039/B303754A 

Bioorthogonal organic chemistry in living cells: novel strategies for labeling biomolecules
Paul F. van Swieten, Michiel A. Leeuwenburgh, Benedikt M. Kessler and Herman S. Overkleeft
DOI: 10.1039/B412558D 

Artificial ribonucleases
Teija Niittymäki and Harri Lönnberg
DOI: 10.1039/B509022A 

Nucleoside, nucleotide and oligonucleotide based amphiphiles: a successful marriage of nucleic acids with lipids
Arnaud Gissot, Michel Camplo, Mark W. Grinstaff and Philippe Barthélémy
DOI: 10.1039/B719280K 

Missed our other 10th anniversary posts? Take a look here for some of our top cited work.   

 

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A Celebration of Organic Chemistry

On Friday 15 June, Professor Keith Smith will host a symposium showcasing the very best in Organic Chemistry.

The symposium features lectures by two Nobel Laureates and an RSC Prize Winner, as well as marking Keith’s retirement from Cardiff University, and celebrating his work within the Organic Chemistry Community.

This event is free to attendbut places are limited, and attendance is only guaranteed by pre-registration – so act now!

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OBC issue 23 now online, complete with peptidyl-fluoromethyl ketones and nanodiamonds in sugar rings

This front cover highlights the work of Daniel P. Funeriu, Technical University München, and colleagues on a novel, general solid phase synthesis strategy for sequence independent peptidyl-fluoromethyl ketones, utilising standard Fmoc peptide chemistry. Read the finer points of this article here
A general solid phase method for the synthesis of sequence independent peptidyl-fluoromethyl ketones
Gheorghe-Doru Roiban, Mihaela Matache, Niculina D. Hădade and Daniel P. Funeriu
DOI: 10.1039/C2OB25096A

On the inside cover of OBC issue 23 is a paper by Bart Jan Ravoo et al. on the non-covalent interactions of nanodiamond carboxylic acids derived from adamantane, diamantane, and triamantane with β- and γ-cyclodextrins.

Nanodiamonds in sugar rings: an experimental and theoretical investigation of cyclodextrin–nanodiamond inclusion complexes
Jens Voskuhl, Mark Waller,  Sateesh Bandaru, Boryslav A. Tkachenko, Carlo Fregonese, Birgit Wibbeling, Peter R. Schreiner and Bart Jan Ravoo
DOI: 10.1039/C2OB06915F

Also in this issue: A perspective by Philippe Maillard et al.: Tumor targeting in photodynamic therapy. From glycoconjugated photosensitizers to glycodendrimeric one. Concept, design and properties

2 HOT articles:
Biomimetic oxidation of aromatic xenobiotics: synthesis of the phenolic metabolites from the anti-HIV drug efavirenzRiccardo Wanke, David A. Novais, Shrika G. Harjivan, M. Matilde Marques and Alexandra M. M. Antunes
DOI: 10.1039/C2OB25212K

Synthesis of symmetric anhydrides using visible light-mediated photoredox catalysis
Marlena D. Konieczynska ,  Chunhui Dai and Corey R. J. Stephenson
DOI: 10.1039/C2OB25463H

Find the complete issue here….

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HOT: Biomimetic oxidation of aromatic xenobiotics: synthesis of the phenolic metabolites from the anti-HIV drug efavirenz

Efavirenz (EFV) is a non-nucleoside reverse transcriptase inhibitor (NNRTI) administered as a first-line treatment against HIV. Despite its efficacy, a major shortcoming is its association with toxic events. The reasons for the drug’s adverse effects are not currently clear, but in order to answer this question the availability of considerable amounts of enantiomerically pure EFV metabolites is essential, to allow in vitro and in vivo toxicological studies.

In this Hot paper Alexandra M. M. Antunes and co-workers report the development of a method for the direct aromatic hydroxylation of EFV, and other xenobiotics, using the easily accessible [FeII(bpmen)(OTf)2]–H2O2 oxidant system in the presence of acetic acid. Antunes et al. say that “This cost-efficient one-pot strategy represents a considerable improvement when compared with the already available methods for the C8 hydroxylation of EFV, avoiding a laborious multi-step synthetic approach and the resolution of racemic mixtures.”

In addition to EFV, Antunes et al. successfully oxidise tamoxifen and equilin into their phenolic metabolites which demonstrates the general application of bio-inspired nonheme Fe-complexes for in vitro access to phenolic species typically formed via cytochrome P450 (CYP)-mediated hydroxylation of aromatic compounds. The possibility of applying an oxidation system mirroring the CYP metabolic pathways predicts the usefulness of the approach for molecular toxicology studies of a large variety of toxic aromatic xenobiotics.

This work represents a proof of concept regarding bio-inspired oxidation technologies and opens new opportunities for this chemistry. To find out more read the article in full here.

This paper will be free to access for the next 4 weeks.

Biomimetic oxidation of aromatic xenobiotics: synthesis of the phenolic metabolites from the anti-HIV drug efavirenz
Riccardo Wanke, David A. Novais, Shrika G. Harjivan, M. Matilde Marques and Alexandra M. M. Antunes
Org. Biomol. Chem., 2012,
DOI: 10.1039/C2OB25212K

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HOT: Synthesis of symmetric anhydrides using visible light-mediated photoredox catalysis

In this HOT communication Corey R. J. Stephenson and colleagues at Boston University demonstrate the application of visible light-mediated photoredox catalysis for the synthesis of symmetric anhydrides. This new approach to anhydride formation proceeds via the activation of C–O bonds by the Vilsmeier–Haack reagent formed by Ru(bpy)3Cl2 and CBr4 in DMF.

Stephenson et al. demonstrate the reaction with various aryl and alkyl carboxylic acids being converted to the corresponding anhydrides in excellent yields and they go on to show the efficacy of the method by performing scale-up reactions.

For the full reaction conditions have a look at this Communication today. As always, this HOT article will be free to access for the next 4 weeks!

Synthesis of symmetric anhydrides using visible light-mediated photoredox catalysis
Marlena D. Konieczynska ,  Chunhui Dai and Corey R. J. Stephenson
DOI: 10.1039/C2OB25463H

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OBC issue 22: artificial O2 and CO receptors and oxidative Umpolung on the covers

Welcome to OBC issue 22!

This colourful front cover is courtesy of Koji Kano and colleagues from Doshisha University. This HOT paper from Kano et al. discusses a study on how to control the circulation time of a synthetic oxygen and carbon monoxide receptor by attaching poly(ethylene glycol) chains to the periphery of an iron porphyrin. By attaching chains of varying molecular weight Kano et al. are successfully able to modify the length of time the receptor remains in the blood stream.

PEGylation of an artificial O2 and CO receptor: synthesis, characterisation and pharmacokinetic study
Takunori Ueda, Hiroaki Kitagishi and Koji Kano
Org. Biomol. Chem., 2012, 10, 4337-4347
DOI: 10.1039/C2OB07044H

The inside cover highlights the work of Nuno Maulide and co-workers, who present a new protocol for the direct 2-electron oxidative Umpolung of halide salts with commercially available sulfoxide. This means that electrophilic halogenations (including halolactonisations) can proceed directly from the corresponding sodium salts.

Sulfoxide-mediated Umpolung of alkali halide salts
Sebastian Klimczyk, Xueliang Huang, Christophe Farès and Nuno Maulide
Org. Biomol. Chem., 2012, 10, 4327-4329
DOI: 10.1039/C2OB25459J

Both of these articles are free to access for 6 weeks, so it’s easy to have a read.

You might also be interested in this perspective by Oskari K. Karjalainen and Ari M. P. Koskinen on the diastereoselective synthesis of vicinal amino alcohols.

View the complete issue here

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Review: Modulation of the antioxidant activity of phenols by non-covalent interactions

This review by Riccardo Amorati and Luca Valgimigli, University of Bologna, is featured in issue 21 of OBC, which can now be found online.

In this Perspective Amorati and Valgimigli summarize some recent results obtained with simplified models, which can aid in understanding the effects of non-covalent interactions, i.e.  intra- and inter-molecular H-bonds, on the radical chemistry of natural phenolic and polyphenolic antioxidants.

Areas of discussion include:

Intramolecular hydrogen bonds:

Reactive OH groups as H-bond donors

Reactive OH groups as H-bond acceptor

Remote H-bond effect

Intermolecular hydrogen bonds

Reactive OH groups as H-bond donors: the “classical” kinetic solvent effect (KSE)

The remote kinetic solvent effect (RKSE)

Other solvent effects

Read this well received review today!

Modulation of the antioxidant activity of phenols by non-covalent interactions
Riccardo Amorati and Luca Valgimigli
Org. Biomol. Chem., 2012, 10, 4147-4158
DOI: 10.1039/C2OB25174D

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OBC issue 21: Novel dafachronic acids and macrocyclic aromatic pentamers on the covers

OBC issue 21 has now landed, and you can find it here….

Hans-Joachim Knölker and co-workers present the stereoselective synthesis of several (25S)-dafachronic acids using an orthogonally diprotected diol as a relay compound. In addition Knölker et al. discuss the hormonal activity of the novel (25S)-dafachronic acids.

Stereoselective synthesis and hormonal activity of novel dafachronic acids and naturally occurring steroids isolated from corals
Ratni Saini, Sebastian Boland, Olga Kataeva, Arndt W. Schmidt, Teymuras V. Kurzchalia and Hans-Joachim Knölker
Org. Biomol. Chem., 2012, 10, 4159-4163
DOI: 10.1039/C2OB25394A


This impressive inside front cover highlights the work of Huaqiang Zeng et al. describing the ability of tetrabutylammonium salts to mediate an efficient mono-/di-demethylation in H-bonded macrocyclic aromatic pentamers, which occur in a chemo- and regionselective fashion.

Folding-promoted TBAX-mediated selective demethylation of methoxybenzene-based macrocyclic aromatic pentamers
Zhiyun Du, Bo Qin , Chang Sun, Ying Liu, Xi Zheng, Kun Zhang, Allan H. Conney and Huaqiang Zeng
Org. Biomol. Chem., 2012, 10, 4164-4171
DOI: 10.1039/C2OB25160D

Take a closer look at both of these articles; they’re free to access for the next 6 weeks!

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Palladium-catalysed aminosulfonylation and the design and synthesis of screening libraries on the cover of issue 20

The covers of this week’s OBC issue are brought to you by Michael C. Willis et al. and Rohan A. Davis et al.

The front cover highlights the work of Michael C. Willis et al. who demonstrate that it is possible to construct C–SO2–N linkages using palladium-catalysed aminosulfonylation processes.

Palladium-catalysed aminosulfonylation of aryl-, alkenyl- and heteroaryl halides: scope of the three-component synthesis of N-aminosulfonamides
Edward J. Emmett, Charlotte S. Richards-Taylor, Bao Nguyen, Alfonso Garcia-Rubia, Barry R. Hayter and Michael C. Willis
DOI: 10.1039/C2OB07034K

The inside front cover shows work from Rohan A. Davis et al. who present the design and synthesis of two screening libraries utilising the muurolane natural product scaffold from the plant E. mitchellii.

Design and synthesis of screening libraries based on the muurolane natural product scaffold
Emma C. Barnes, Vanida Choomuenwai, Katherine T. Andrews, Ronald J. Quinn and Rohan A. Davis
DOI: 10.1039/C2OB00029F

Don’t forget, access to these cover articles is FREE for the next 6 weeks.

Also in this issue is the HOT article ‘Synthetic UDP-galactofuranose analogs reveal critical enzyme–substrate interactions in GlfT2-catalyzed mycobacterial galactan assembly‘ which was highlighted in the C&EN news story ‘Determining Sugar Sequence Fidelity‘.

Find all of issue 20 here

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