Archive for the ‘Hot Articles’ Category

HOT article: magnetic bead-based assay for MRSA rapid detection – what an attractive idea!

In recent years methicillin-resistant Staphylococcus aureus (MRSA) has become one of the most prevalent antibiotic resistant pathogens in hospitals and as such there is an urgent need for a way of rapidly detecting it to limit the spread of the infection.

Current methods of detection, involving the use of PCR, require quite bulky, power-intensive and quite expensive apparatus. Gwo-Bin Lee et al. have developed a portable hand-held system where the entire diagnostic protocol, from bio-sample pre-treatment to optical detection, can be automatically completed within an hour and with a limit of detection 1000- fold higher than conventional bench-top PCR systems.

The entire process can be accomplished automatically via magnetic bead-based hybridization of the target DNA purified from clinical samples, a loop-mediated isothermal amplification process for the amplification of the target genes, and then spectrophotometric analysis of the amplified target genes.

To find out more take a look at this HOT article which is FREE to view for 4 weeks!

A magnetic bead-based assay for the rapid detection of methicillin-resistant Staphylococcus aureus by using a microfluidic system with integrated loop-mediated isothermal amplification
Chih-Hung Wang, Kang-Yi Lien, Jiunn-Jong Wu and Gwo-Bin Lee
Lab Chip, 2011, 11, 1521-1531
DOI: 10.1039/C0LC00430H

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HOT article: no need to shed light on this T cell counter!

Antiretroviral therapy (ART) increases the longevity and quality of life for HIV patients.  The lack of objective diagnostic tests to determine when to start ART and to monitor its successes hinders the effective use of treatment.  An important diagnostic procedure is to obtain a patient’s CD4+ lymphocyte count, which is traditionally carried out using optical instrumentation. However, the cost and technical requirements of such equipment make them infeasible as analytical methods in poorer countries.

William Rodriguez (Daktari Diagnostics) and Rashid Bashir (University of Illinois) present a solution to this problem with their novel microfabricated biochip to enumerate CD4+ T lymphocytes from healthy human subject blood samples.

Their biochip incorporates electrical impedance sensing coupled with immunoaffinity chromatography to electrically differentiate CD4+ cells from other leukocytes with accuracy comparable to current optical diagnostic methods.  This negates any requirement for labelling or optical detection, while its microfabricated nature suggests it may be an inexpensive, simple and portable alternative to current flow cytometric practises.

Learn more about this device by reading this HOT article, which is free to access for the next 4 weeks!

A microfabricated electrical differential counter for the selective enumeration of CD4+ T lymphocytes
Nicholas N. Watkins, Supriya Sridhar, Xuanhong Cheng, Grace D. Chen, Mehmet Toner, William Rodriguez and Rashid Bashir
Lab Chip, 2011, 11, 1437-1447
DOI: 10.1039/C0LC00556H

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HOT article: a chip for rapid detection of toxic drug metabolites

In drug discovery it is important to know as early as possible whether a potential drug candidate forms toxic metabolites or not.  Normally, each drug candidate must be evaluated by extensive in vitro metabolism experiments however these are generally time-consuming and expensive.

Scientists in Finland, however, have developed a microchip to mimic phase I metabolic reactions of low-molecular weight compounds.  Raimo Ketola and colleagues at the University of Helsinki have designed an integrated TiO2 nanoreactor/ionisation chip with UV radiation and direct MS analysis to produce and identify photocatalysed reaction products of selected drug molecules.

This enables rapid on-line analyses which have shown remarkable consistency with metabolites obtained from other in vivo and in vitro methods.  It is hoped that this technique, with its rapid prediction of phase I metabolites, will speed up the discovery of new potential drug candidates.

TiO2 nanoreactor setup

This HOT article is available to download, free of charge, for the next 4 weeks – careful, don’t burn your fingers!

Integrated photocatalytic micropillar nanoreactor electrospray ionization chip for mimicking phase I metabolic reactions
Teemu Nissilä, Lauri Sainiemi, Mika-Matti Karikko, Marianna Kemell, Mikko Ritala, Sami Franssila, Risto Kostiainen and Raimo A. Ketola
Lab Chip, 2011, Advance Article
DOI: 10.1039/C0LC00689K

Teemu Nissilä, Lauri Sainiemi, Mika-Matti Karikko, Marianna Kemell, Mikko Ritala, Sami Franssila, Risto Kostiainen and Raimo A. Ketola
Lab Chip, 2011,
DOI: 10.1039/C0LC00689K
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HOT article: twice the tweezering!

A platform capable of seamlessly unifying both optoelectrowetting and optoelectronic tweezers has been developed by Justin Valley and co-workers from the Berkeley Sensor and Actuator Center.

The device requires no lithographically defined microelectrodes as it uses light patterning to define the electrodes, which means that manipulation of droplets and the particles within these droplets can occur anywhere on the device surface. Switching between manipulating droplets to manipulating the particles in those droplets is merely a case of altering an externally applied electric frequency.

Learn more about the device by reading this HOT article, which is free to access for the next 4 weeks!

A unified platform for optoelectrowetting and optoelectronic tweezers
Justin K. Valley, Shao NingPei, Arash Jamshidi, Hsan-Yin Hsu and Ming C. Wu
Lab Chip, 2011, Advance Article
DOI: 10.1039/C0LC00568A

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New filters for fluorescence detection – UK special issue paper

A simple technique for making non-emissive colour filters for microfluidics applications has been developed by John deMello and colleagues at Imperial College, London. Their approach, described recently in Lab on a Chip, employs a solely dye-based method to create high performance filters avoiding the expense and variability inherent in interference filters. The authors highlight the advantages of lower cost and lower auto-fluorescence which could be good news for the analytical chemistry community.

Read the full article here and why not take a sneak preview of the special issue in which it will be included, the UK 10th Anniversary issue, by reading the introductory Editorial by Andrew deMello and Hywel Morgan.

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HOT article: rapid identification of ‘bird-flu’

Reverse transcriptase PCR (RT-PCR) has been introduced as the most sensitive method for detecting and pathotyping the avian influenza virus (AIV) or ‘bird flu’, however the number of targets that can be amplified in a single run is limited.

Now chemists at the Technical University of Denmark have developed a device for the rapid and unambiguous detection of AIV by integrating DNA microarray-based solid-phase PCR on to a microfluidic chip. This combines the advantages of microfluidic devices, the high-throughput capabilities of microarrays and the superior specificity of solid-phase PCR. The whole process takes under an hour and uses a sample volume 10 times less than anything previously, meaning that this device can be widely employed by veterinarians for rapid on-site screening of AIV in wild and domestic poultries.

Find out more by reading this HOT article, which is free to access for the next 4 weeks!

A lab-on-a-chip device for rapid identification of avian influenza viral RNA by solid-phase PCR
Yi Sun, Raghuram Dhumpa, Dang Duong Bang, Jonas Høgberg, Kurt Handberg and Anders Wolff
Lab Chip, 2011, Advance Article
DOI: 10.1039/C0LC00528B

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HOT article: precise, high speed droplet formation

Isolating biological or biochemical content in aqueous droplets within an immiscible oil medium on a microfluidic device allows samples to be transported without cross-contamination or dispersion.  But generating droplets at a suitably high speed with precise volume control has been a challenge.

Now Pei-Yu Chiou and Sung-Yong Park from UCLA have developed a pulse laser-driven droplet mechanism that allows droplet formation of up to 10000 droplets per second with controllable volumes between 1-150 pL and >1% volume variation.

Their device (shown below) consists of two microfluidic channels connected by a nozzle-like opening. A highly focused intense laser pulse induces a rapidly expanding cavitation bubble to push the nearby water into the oil channel for droplet formation.

This HOT article is free to access until the end of March – so download it today and see how they did it!

High-speed droplet generation on demand driven by pulse laser-induced cavitation
Sung-Yong Park, Ting-Hsiang Wu, Yue Chen, Michael A. Teitell and Pei-Yu Chiou
Lab Chip, 2011, 11, 1010-1012
DOI: 10.1039/C0LC00555J

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Unravelling chromosomes

Chromosomes were extracted by washing cell extracts with a protein digester in a microfluidic trap

Danish scientists have used a micro device to isolate centimetre-long portions of human DNA to help study the genetic make-up of diseased cells.

Rodolphe Marie at the Technical University of Denmark, Kongens Lyngby, and colleagues made the device to isolate chromosomes from cell extract samples and manipulate them in such a way that the strands remain intact.

Being able to sequence DNA accurately is a challenge, but Marie’s technique allows the DNA to remain intact so that the gene sequence can be read in one go. The device is made from silicon and consists of an isolation zone in which cell samples are trapped and washed to obtain chromosomes.

Read Catherine Bacon’s Chemistry World article online here or go straight to the HOT Lab on a Chip paper:

A device for extraction, manipulation and stretching of DNA from single human chromosomes
Kristian H. Rasmussen, Rodolphe Marie, Jacob M. Lange, Winnie E. Svendsen, Anders Kristensen and Kalim U. Mir
Lab Chip, 2011, Advance Article
DOI: 10.1039/c0lc00603c

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Liquid metal electrodes in microfluidic devices

Researchers from North Carolina State University have developed a faster, easier way to create microelectrodes, for use in microfluidic devices, by using liquid metal.

Read the full article by Ju-Hee So and Michael Dickey in the latest issue of Lab on a Chip here.

And why not check out some of the other articles in the same issue?

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Crime scene DNA testing on the move

A microfluidic chip that can come up with a DNA profile in less than three hours has been designed by US scientists for use at crime scenes.

With current techniques, forensic scientists have to wait up to eight hours to get results. Using microchips to speed up the process has been investigated but integrating all of the profiling steps in one device has remained elusive until now. Richard Mathies from the University of California, Berkeley, and colleagues, in collaboration with the US Department of Justice, have produced a portable method to test DNA at a crime scene that integrates all of the steps in one device.

Andy Hopwood, an expert in DNA analysis techniques from the UK’s Forensic Science Service, believes that the work is ‘without a doubt a very exciting and significant development toward the total integration of the DNA-based human identification process onto a single microchip’.

Read Holly Sheahan’s Chemistry World article online here or go straight to the HOT Lab on a Chip paper:

Integrated DNA purification, PCR, sample cleanup, and capillary electrophoresis microchip for forensic human identification
Peng Liu, Xiujun Li, Susan A. Greenspoon, James R. Scherer and Richard A. Mathies
Lab Chip, 2011, 11, 1041
DOI: 10.1039/c0lc00533a

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