Author Archive

More accurate modelling of electron transfer in DNA

Table of contents imageScientists using computational techniques to look at electron-transfer processes in DNA have employed a surface-hopping approach to predict the degree of charge localisation across nucleobases. The technique should allow more accurate modeling of the effects of charge transfer within the molecule.

Different computational approaches often predict varying degrees of charge delocalisation. The commonly used mean-field method often exaggerates the degree to which charge is spread out, because of the self-interaction error inherent to DFT modeling. The surface-hopping method used in this study, however, does not suffer from such difficulties and treats transitions between charge states as distinct jumps between states.

Check out the full details of this exciting article:

Efficient algorithms for the simulation of non-adiabatic electron transfer in complex molecular systems: application to DNA
Tomáš Kubař and Marcus Elstner
DOI: 10.1039/C3CP44619K

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Non-lanthanide materials for telecommunication?

Hand holiding fibreopticsTelecommunication operates primarily in three wavelength windows: 750 nm to 850 nm, 1310 nm and 1530 nm to 1560 nm; where the latter is the best as a consequence of low loss-levels and the invention of erbium signal amplifiers. Nevertheless, other carbon based materials are sought in an attempt to replace, and maybe supersede, the rare earth containing systems that are used today.
Xiaoting Liu and co-workers have in ‘New insights into two-photon absorption properties of functionalized aza-BODIPY dyes at telecommunication wavelengths: a theoretical study’ embarked on a road toward the better understanding of two-photon cross-sections. In this particular case, systems based on BODIPY dyes are under theoretical scrutiny, in attempt to find a system that can work—via two-photon absorption—in the optical windows used in telecommunication.

The fact that the direct absorption of the f–f transitions are low—typically with molar absorptivities below 1 M-1cm-1—are the reason why two-photon processes might be able to compete with absorption by lanthanide ions. The systems studied in the paper never quite reach the 1510 nm window, but do make it to 1310 nm by two-photon absorption. In fact, single photon absorption of some of the systems under investigation is found to be in the high energy/high frequency range of the telecommunication window around 800 nm.

Intrigued? For the molecular structures and much, much more see:

New insights into two-photon absorption properties of functionalized aza-BODIPY dyes at telecommunication wavelengths: a theoretical study
Xiaoting Liu, Jilong Zhang, Kai Li, Xiaobo Sun, Zhijian Wu, Aimin Ren and Jikang Feng
Phys. Chem. Chem. Phys., 2013, 15, 4666-4676
DOI: 10.1039/C3CP44435J

by Dr Thomas Just Sørensen

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Gold? Silver? Does it matter?

Figure from DOI: 10.1039/C2CP43365F The plasmons of bimetallic nanorods appear by cursory inspection to be independent of the composition! Pure gold, silver-gold-silver, pure silver, it matters not.
The ratio (length) of the nanorod, which is gold, can be varied from 0 nm to 200 nm in the 200 nm long nanorods, without changing the shape or position of the plasmonic bands. It happens to be coincidental that 200 nm long rods give this result, as the dielectric function of silver and gold are similar at the energies the plasmonic resonances are found at in 200 nm long nanorods.

A team of Korean scientist have been investigating mixed-metal nanorods, either 100 nm or 200 nm long. They find that the interfaces between the metals have little effect on the plasmonic resonances in the system. The single most important factor is the match of the dielectric function for the two metals, if the functions match the composition of the metal nanorod can be varied without any effect in the plasmons. A very interesting conclusion.

by Dr Thomas Just Sørensen

For the full details of this exciting article see:

Localized plasmon resonances of bimetallic AgAuAg nanorods
Sung-Hyun Ahn, Deok-Soo Kim, Daeha Seo, Wonjun Choi, Gi-Ra Yi, Hyunjoon Song, Q-Han Park and Zee Hwan Kim
DOI: 10.1039/C2CP43365F

This article is part of the PCCP themed collection on Optical studies of single metal nanoparticles. Check out the rest of the articles today.

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Top ten most accessed articles in January

The following articles in PCCP were the top ten most accessed in January:-

Graphene oxide for effective radionuclide removal
Anna Yu. Romanchuk, Alexander S. Slesarev, Stepan N. Kalmykov, Dmitry V. Kosynkin and James M. Tour
DOI: 10.1039/C2CP44593J

Evidence of catalyzed oxidation of Li2O2 for rechargeable Li–air battery applications
Jonathon R. Harding, Yi-Chun Lu, Yasuhiro Tsukada and Yang Shao-Horn
DOI: 10.1039/C2CP41761H

Electronic interactions and charge transfers of metal atoms and clusters on oxide surfaces
Gianfranco Pacchioni
DOI: 10.1039/C2CP43731G

Proton reduction to hydrogen in biological and chemical systems
Phong D. Tran and James Barber
DOI: 10.1039/C2CP42413D

Graphene-based electrochemical energy conversion and storage: fuel cells, supercapacitors and lithium ion batteries
Junbo Hou , Yuyan Shao, Michael W. Ellis, Robert B. Moore and Baolian Yi
DOI: 10.1039/C1CP21915D

Increasing organic solar cell efficiency with polymer interlayers
Felix Deschler, Daniel Riedel, Bernhard Ecker, Elizabeth von Hauff, Enrico Da Como and Roderick C. I. MacKenzie
DOI: 10.1039/C2CP43876C

Plasmonic photocatalysts: harvesting visible light with noble metal nanoparticles
Peng Wang, Baibiao Huang, Ying Dai and Myung-Hwan Whangbo
DOI: 10.1039/C2CP40823F

Temperature effects in dye-sensitized solar cells
Sonia R. Raga and Francisco Fabregat-Santiago
DOI: 10.1039/C2CP43220J

Persistent misconceptions regarding SERS
Martin Moskovits
DOI: 10.1039/C2CP44030J

Reversible chemical delithiation/lithiation of LiFePO4: towards a redox flow lithium-ion battery
Qizhao Huang , Hong Li , Michael Grätzel and Qing Wang
DOI: 10.1039/C2CP44466F

We hope you enjoyed reading the articles – please sign up for the free PCCP table of contents e-alerts to make sure you keep up to date with the latest research being published in the journal

On behalf of the Editorial Board of  PCCP, we invite you to submit your best research to us today!

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2013 PCCP – Chemical Society of Japan Prizes

We are delighted to announce the winners of the 2013 PCCP Prizes for Outstanding Achievement of Young Scientists in Physical Chemistry and Chemical Physics. These were awarded to:

  • Dr Yusuke Yamauchi (National Institute for Materials Science (NIMS)) for his work on “Nano-to-Microgram Scale X-ray Crystallography of Non-crystalline Compounds Using Crystalline Sponges”
  • Dr Yasutomo Segawa (Nagoya University) for his research on “Size-selective Synthesis and Optical Properties of Carbon Nanorings”
  • Dr Yasuhide Inokuma (The University of Tokyo) for his work on “Rational Synthesis of Nanoporous Platinum Particles with Multiple Architectures toward Highly Active Electrocatalysts”
  • Photograph of Dr Yasuhide Inokuma

    Dr Yasuhide Inokuma

    Photograph of Dr Yasutomo Segawa

    Dr Yasutomo Segawa

    Photograph of Dr Yasuhide Inokuma

    Dr Yusuke Yamauchi

    Congratulations to all three prize winners who will receive a commemorative book, a PCCP Prize certificate and a financial award.

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    Automatic tracking of the movement of single molecules

    A method for automatically tracking single fluorescent molecules has been described by scientists developing new techniques in single molecule microscopy (SMM).

    The ability to detect and follow single fluorescent molecules provides a unique insight into the diffusion processes occurring in material science and biological systems. SMM is fraught with technical challenges, however, with low signal-to-noise-ratios and ‘blinking’ of fluorescent molecules making them difficult to track.

    To overcome these issues, a new method of data analysis is described, and made available to the scientific community as open-source Matlab code by the authors.

    Read this HOT PCCP article in full:

    A novel method for automatic single molecule tracking of blinking molecules at low intensities

    Dominik Wöll, Christoph Kölbl, Beate Stempfle and Andreas Karrenbauer
    DOI: 10.1039/C3CP44693J

    This article is part of the PCCP web collection on biophysics and biophysical chemistry – take a look today!

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    Combinatorial evaluation of metal oxides for water splitting

    A new dispenser and scanner system has been developed that creates and screens arrays of different metal oxides, assessing there suitability for photocatalytic water-splitting reactions. The technique operates in a combinatorial fashion and has been used to screen over 3000 unique Bi:M:Cu atomic ratios, where M represents one of 22 post-transition metals.

    Of the 22 metals tested, 10 were found to have a M-Cu oxide with higher photochemical activity than CuO, while 10 had a Bi-M-Cu oxide with more activity than CuBi2O4. The best performing combination was BiAgCu oxide with the ratio 22:3:11, which produced a photocurrent four times that of CuBi2O4. The material was capable of evolving hydrogen from neutral electrolyte solutions under illumination at 0.6V vs RHE when platinum was added as an electrocatalyst.

    Read the full details of this fascinating PCCP article:

    Screening of transition and post-transition metals to incorporate into copper oxide and copper bismuth oxide for photoelectrochemical hydrogen evolution
    Sean P. Berglund, Heung Chan Lee, Paul D. Núñez, Allen J. Bard and C. Buddie Mullins
    DOI: 10.1039/C3CP50540E

    Table of contents image

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    Tighter control over high-power dual-pulse EPR experiments

    Scientists in Germany and the USA report a method for measuring pulsed electron paramagnetic resonance (EPR) spectra using a free-electron laser as a radiation source in their Physical Chemistry Chemical Physics (PCCP) article. The high power afforded by the laser enables EPR experiments to be carried out at 240GHz, which significantly enhances the sensitivity of the technique.

    The authors of the study have solved the problem of random phase shifts of the free-electron pulse using retrospective data processing, and are able to control phases between pulses, enabling two-pulse experiments that are fundamental to EPR.

    Read about this exciting development today:

    Phase cycling with a 240 GHz, free electron laser-powered electron paramagnetic resonance spectrometer
    Devin T Edwards, Yun Zhang, Steffen J Glaser, Songi Han and Mark Sherwin
    DOI: 10.1039/C3CP44492A

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    Synthetic lanthanide doped minerals

    Figure from PCCP article DOI: 10.1039/C2CP44195KDoping various mineral oxides with lanthanide ions is one of the big trends at the moment. Possibly because of the wide application of lanthanide ions in lighting, bioanalysis and telecommunication, possibly because all you need is an oven and a big laser in order to study something as interesting as the processes in the lanthanide excited state manifold.

    Singh and co-workers have doped an yttrium titanium oxide with erbium an ytterbium and studied the luminescence following energy up-conversion. Subsequently, they used laser ablation to pulverise the mineral and studied the powder. Most intriguing, they find that the amount of red and green light emitted vary as a function of laser power.

    Lanthanide luminescence, originating from f–f transitions, where the only the f-electron configuration changes, is intriguing as it can occur all across the spectrum, from numerous excited states to multiple other excited states, some of which may even be emissive as well.

    While organic chromophores have one ground state, one excited state and a triplet state wherein the molecule may stay for more than picoseconds, lanthanide ions have several if not many. Ytterbium is the only exception, with only one; a consequence of the nearly full f-shell. The shielded nature of the f-orbitals allow for slow processes in the excited state manifold, where the excited states are only quenched by high-energy phonon or vibrational modes in the surroundings. Thus, although energy up-conversion is possible through several pathways, excited state absorption usually dominates.

    Structural and up-conversion properties of Er3+ and Yb3+ co-doped Y2Ti2O7 phosphors” by B. P. Singh , A. K. Parchur , R. K. Singh , A. A. Ansari , P. Singh and S. B. Rai is a comprehensive study of the photophysics of erbium and ytterbium doped in a solid state lattice. For the full account see issue 10 of PCCP: Phys. Chem. Chem. Phys., 2013,15, 3480-3489.

    by Dr Thomas Just Sørensen

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    Introducing a common basis

    Table of contents imageThis paper from the group of Matthias Arenz at the Nano-Science Center at the University of Copenhagen may prove crucial for comparing catalysts and catalyst matrices for low temperature fuel cells.

    In “Pt based PEMFC catalysts prepared from colloidal particle suspensions – a toolbox for model studies” Speder and co-workers demonstrate the applicability of their approach to catalyst fabrication in a model study. The key result is that their catalyst synthesis allow for accurate comparison of different catalyst systems as their procedures are reproducible and yield consistent results.

    Fuel cell catalysts on solid supports have been difficult to compare, as the means of their preparation introduce differences, often larger than those variations resulting from the parameter under study. The work summarized in this paper opens a way around this issue, making comparative study feasible. Of this reason alone you should have a look at the paper. On top of that you get the interesting result regarding the anchoring of Pt catalyst particles to the carbon support.

    by Dr Thomas Just Sørensen

    Read the full details of this HOT PCCP article today:

    Pt based PEMFC catalysts prepared from colloidal particle suspensions – a toolbox for model studies
    Jozsef Speder, Lena Altmann, Melanie Roefzaad, Marcus Bäumer, Jacob J. K. Kirkensgaard, Kell Mortensen and Matthias Arenz
    DOI: 10.1039/C3CP50195G

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