Formation of kidney stones

Human kidney stones contain over 200 components, most significantly, anhydrous uric acid (UA, below) and its dihydrate (UAD).  When UAD is present, UA is also, however the reverse isn’t always true. This  suggests the conversion of UAD to UA may be a significant step in the formation of kidney stones.  A deeper understanding of how the stones form could inform strategies to prevent their formation and to disperse them once formed.

uric acid

A new paper in CrystEngComm looks at the relationship between UAD and UA under physiologically relevant conditions.  The authors studied the behaviour of UAD in aqueous solution at body temperature (37oC), both at various pHs in the presence of a buffer and in an artificial urine solution. In aqueous solution at acidic pH values, the conversion of UAD occured via a slow dissolution, followed by recrystallization, to form UA over 42 hours. At neutral pH, the final product formed was uric acid monohydrate (UAM), which was obtained either directly or via a UA intermediate. In urine solution, UA formation was much faster (complete in 30 hours) and crystals were much smaller.

The rate limiting step is believed to be the dissolution of UAD, with the timescale of the UA formation explaining why UAD is rarely found in the absence of UA.  Future studies will look at how other urinary components and/or additives can affect UA formation.

For more information, see the full paper:

Solution-mediated phase transformation of uric acid dihydrate
Janeth B. Presores and Jennifer A. Swift
CrystEngComm, 2014, DOI: 10.1039/C4CE00574K

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Gwenda KydGwenda Kyd has a PhD in metallocarborane chemistry from the University of Edinburgh. Other research work includes the spectroscopic study of the structure of glasses and organometallic electron-transfer reactions and the preparation of new inorganic phosphors.  She has recently published a book on chemicals from plants.

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Top 10 most downloaded CrystEngComm articles

During the first quarter of 2014 (January, February and March) the most downloaded CrystEngComm articles were:

Layered organic–inorganic hybrid perovskites: structure, optical properties, film preparation, patterning and templating engineering 
Ziyong Cheng and Jun Lin 
CrystEngComm, 2010, 12, 2646-2662 
DOI: 10.1039/C001929A 

Rare earth fluorides upconversion nanophosphors: from synthesis to applications in bioimaging 
Song Wang, Jing Feng, Shuyan Song and Hongjie Zhang 
CrystEngComm, 2013, 15, 7142-7151 
DOI: 10.1039/C3CE40679B  

The synthesis of a novel Ag–NaTaO3 hybrid with plasmonic photocatalytic activity under visible-light 
Dongbo Xu, Min Chen, Shuyan Song, Deli Jiang, Weiqiang Fan and Weidong Shi 
CrystEngComm, 2014, 16, 1384-1388 
DOI: 10.1039/C3CE41919C 

Facile Cl-mediated hydrothermal synthesis of large-scale Ag nanowires from AgCl hydrosol  
Wenlong Yang, Jingjing Li, Yijun Zhong, Haisheng Qian, Zhengquan Li and Yong Hu 
CrystEngComm, 2013, 15, 2598-2600 
DOI: 10.1039/C3CE26925F  

Synthesis of Cu2O/ZnO hetero-nanorod arrays with enhanced visible light-driven photocatalytic activity  
Xinwei Zou, Huiqing Fan, Yuming Tian and Shijian Yan 
CrystEngComm, 2014, 16, 1149-1156 
DOI: 10.1039/C3CE42144A 

A new synthetic route to hollow Co3O4 octahedra for supercapacitor applications 
Yuebin Cao, Fangli Yuan, Mingshui Yao, Jin Ho Bang and Jung-Ho Lee 
CrystEngComm, 2014, 16, 826-833 
DOI: 10.1039/C3CE41840E  

Enhanced reactive oxygen species on a phosphate modified C3N4/graphene photocatalyst for pollutant degradation 
YuLin Min, Xian Feng Qi, QunJie Xu and YouCun Chen 
CrystEngComm, 2014, 16, 1287-1295 
DOI: 10.1039/C3CE41964A 

Synthesis of graphene–ZnO nanorod nanocomposites with improved photoactivity and anti-photocorrosion  
Zhang Chen, Nan Zhang and Yi-Jun Xu 
CrystEngComm, 2013, 15, 3022-3030 
DOI: 10.1039/C3CE27021A  

Characterizing crystal growth by oriented aggregation 
R. Lee Penn and Jennifer A. Soltis 
CrystEngComm, 2014, 16, 1409-1418 
DOI: 10.1039/C3CE41773E  

Polymorphism in cocrystals: a review and assessment of its significance  
Srinivasulu Aitipamula, Pui Shan Chow and Reginald B. H. Tan 
CrystEngComm, 2014, 16, 3451-3465 
DOI: 10.1039/C3CE42008F

Interesting? Let us know your thoughts in the comment section below:

Direct submissions to CrystEngComm can be made here: http://mc.manuscriptcentral.com/ce

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Core-shell nanorods with the best of both worlds

Posted on behalf of Josh Campbell, web writer for CrystEngComm 

A new paper in CrystEngComm details the successful synthesis of tungsten oxide (WO3) mixed amorphous/crystalline nanostructures. These 1D, hexagonal nanorods show electrochromic performances that combine the high optical modulation and quick response times of amorphous WO3 with the improved stability of crystalline phases.

Researchers synthesised the nanostructures using a two-step hydrothermal process by growing the crystalline core first before the amorphous shell on the rod’s surface. They found that the thickness of the amorphous shells could be varied by altering the length of the second step. They used sodium cations to stop the conversion of the hexagonal WO3 phase to the monoclinic form encouraging the formation of the rod architectures by promoting growth along the c-axis.

The large surface area of the amorphous shells allowed for rapid bleaching and coloration as most of the electrolyte ions were kept away from the surface of the core. The cores of the structures helped increase the stability of the material by increasing its density and crystallinity.

WO3 core-shell nanorods 

Getting a balance between amorphous and crystalline properties is important in electrochromic device performance. Materials scientists have studied amorphous WO3 thin films extensively as they show fast response times and high coloration efficiency. Unfortunately they make for unstable devices due to their disordered structures.

Researchers have since discovered that crystalline WO3 offers much better stability due to its dense and ordered structure but lacks the performance needed for practical applications. Nanostructures with the best of both worlds may allow increased property control and performance in future devices.

Read the full article for more details: 

Facile synthesis of one-dimensional crystalline/amorphous tungsten oxide core/shell heterostructures with balanced electrochromic properties
Yung-Chiun Her and Chia-Chun Chang
CrystEngComm, 2014, DOI10.1039/C4CE00430B 


Josh Campbell Josh Campbell is a PhD student, currently at the University of Southampton, UK studying crystal structure prediction of organic semiconductors. He received his BSc from the University of Bradford.
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Nanostructures for removing NOx from exhausts.

Iron vanadate (FeVxOy) nanostructures have shown very good performance in sensors, lithium batteries and as catalysts.  Their properties are strongly related to the shape and surface area of the particles and this makes the controllable preparation of one dimensional (1D) nanostructures (i.e. nanowires or nanorods), with large surfaces areas, a target for scientists.

A new paper reports a simple hydrothermal technique which achieves this.   The length of the particles can be adjusted simply by varying the pH of the reaction mixture between pH 4 and pH 6, with longer wires favoured at higher pH, as shown in the diagram below.  Using this methodology, lengths from several micrometers to several millimetres can be obtained and the ratios of diameters to lengths can also be varied from 10 to over 1000. In addition, the pore sizes in the nanostructures can also be controlled using the same method of pH variation.

Tunable nanostructures via hydrothermal syntheses

There are four steps in the  formation of the nanostructures – dissolution, anisotropic growth (i.e. growth in one direction), Ostwald ripening (a process where smaller particles dissolve and deposit on larger particles to achieve more thermodynamically stable particles) and, finally, pore formation by loss of water molecules.

A sample of one of the prepared nanostructures (FeVO4 nanorods) was tested for use in selective catalytic reduction (SCR) of NO with NH3 as the reduction of NOx emissions from diesel engines is important to reduce air pollution.  The nanorods proved stable and selective under typical reaction conditions and, in addition, were resistant against two major catalyst poisons present in exhaust fumes, H2O and SO2.

For more information, read the full paper using the link below:

Hydrothermal growth and characterization of length tunable porous iron vanadate one-dimensional nanostructures
Lei Huang, Liyi Shi, Xin Zhao, Jing Xu, Hongrui Li, Jianping Zhang and Dengsong Zhang
CrystEngComm, 2014, DOI: 10.1039/C3CE42608D

_______________________________________________________________________________________________________

Gwenda KydGwenda Kyd has a PhD in metallocarborane chemistry from the University of Edinburgh. Other research work includes the spectroscopic study of the structure of glasses and organometallic electron-transfer reactions and the preparation of new inorganic phosphors. Currently, she is writing a book on chemicals from plants

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HOT articles for May!

Check out our new HOT articles for May and keep on checking as these are updated every week and more importantly – free to access for 4 weeks!

The influence of ZnO-binding 12-mer peptides on bio-inspired ZnO formation
Johannes Baier, Nina J. Blumenstein, Jan Preusker, Lars P. H. Jeurgens, Udo Welzel, Tuan A. Do, Jürgen Pleiss and Joachim Bill
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00520A

Graphical Abstract

Free to access until 10th June 2014

 


Influence of the anion nature on styryl dye crystal packing and feasibility of the direct and back [2 + 2] photocycloaddition reactions without single crystal degradation
Lyudmila G. Kuz’mina, Artem I. Vedernikov, Andrei V. Churakov, Elmira Kh. Lermontova, Judith A. K. Howard, Michael V. Alfimov and Sergey P. Gromov
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00266K

Graphical Abstract

Free to access until 10th June 2014

 


Illuminating host–guest cocrystallization between pyrogallol[4]arenes and the ionic liquid 1-ethyl-3-methylimidazolium ethylsulfate
Drew A. Fowler, Constance R. Pfeiffer, Simon J. Teat, Christine M. Beavers, Gary A. Baker and Jerry L. Atwood
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00359D

Graphical Abstract

Free to access until 3rd June 2014


Weakening of the π*–π* dimerisation in 1,2,3,5-dithiadiazolyl radicals: structural, EPR, magnetic and computational studies of dichlorophenyl dithiadiazolyls, Cl2C6H3CNSSN
Christos P. Constantinides, Dana J. Eisler, A. Alberola, Emma Carter, Damien M. Murphy and Jeremy M. Rawson
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00308J

Graphical Abstract

Free to access until 3rd June 2014


 

Experimental evidence of negative linear compressibility in the MIL-53 metal–organic framework family
Pablo Serra-Crespo, Alla Dikhtiarenko, Eli Stavitski, Jana Juan-Alcañiz, Freek Kapteijn, François-Xavier Coudert and Jorge Gascon
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00436A

Graphical Abstract

Free to access until 29th May 2014


Which intermolecular interactions have a significant influence on crystal packing?
Robin Taylor
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00452C

Graphical Abstract

Free to access until 29th May 2014


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CrystEngComm Editor’s choice

In this Editor’s choice post, Professor Nicola Pinna, a member of  the CrystEngComm Editorial Board, talks about his favourite articles published in the journal in recent months. Nicola has chosen the most interesting articles in the area of controlled growth of nanostructured materials.  

Faegheh Hoshyargar, Enrico Mugnaioli, Robert Branscheid, Ute Kolb, Martin Penthofer and Wolfgang Tremel 
CrystEngComm, 2014, DOI:  10.1039/C4CE00326H    

Mechanistic analyses of nanoscale transformations are not easily accessible, however this case reported by Hoshyargar and co-workers is an exception as the authors managed to follow the transformation of tungsten oxide nanostructures to WS2 hollow particles. The starting material was synthesized by my favourite approach: a simple, solvothermal treatment of a tungsten alkoxide in benzyl alcohol, with the well-defined tungsten oxide nanoplatelets being subsequently converted to WS2 by sulfidization at higher temperature. The growth mechanism was investigated by applying advanced electron microscopy techniques at different stages of the solid state reaction. The final product, the “hollow rectangular WS2 nanoboxes”, was shown to be formed by “a cascade” of topotactic and epitactic processes. What I found the most astonishing was the last step of the mechanism, involving the fusion of the layered WS2 sheets forming almost perfect rectangular boxes with 90° kinks (see figure below).

layered tungsten sulfide sheets


Unconventional upright layer orientation and considerable enhancement of proton–electron conductivity in Dion–Jacobson perovskite thin films
Tomohiko Nakajima, Kiyoshi Kobayashi, Kentaro Shinodaa and Tetsuo Tsuchiyaa
CrystEngComm, 2014, 16, 4113-4119

Single crystal substrates are generally needed for growth of single-crystalline and highly-oriented oxide thin films. However, such an approach cannot be used in industrial applications for which the growth of highly-oriented oxide thin films should take place on common substrates. In this article, Nakajima et al. show that by pulsed laser-assisted annealing of an oxide precursor thin film that is spin coated from a molecular precursor solution, single crystalline RbCa2Nb3O10 layered perovskite thin films can be obtained. The peculiarity of these films is that they show upright layer orientations (see figure below) which may allow for them to be used as membranes for fuel cells due to the potential for high proton conductivity in the interlayer sites. The unusual orientation of the films is possibly connected to oxygen deficiencies near the surface which as caused by the high laser power needed to obtain the upright layer orientation.

layered perovskite thin films


Layered titanosilicates for size- and pattern-controlled overgrowth of MFI zeolite
Stanislav Ferdov
CrystEngComm, 2014, DOI10.1039/C3CE42644K

There is a need for controlling the growth of zeolites on different substrates which can only be achieved by understanding of the heterostructural interconnections between the support and the zeolite material.  This is particularly relevant for industrial applications such as catalysis. In this work, Stanislav Ferdov reports that plate-like crystals of two titanium silicates can act as interesting substrates for the controlled growth of an MFI-type zeolite. The different arrangement of the SiO4 tetrahedra and TiO6 octahedra in the two chosen titanosilicates govern the overgrowth behaviour. In one case, the plate-like crystals of the titanosilicate (20–40 μm) are covered with a monolayer of regularly packed-zeolite crystals (see figure below left). In the second case, the support acts as a single-nucleation site and only isolated and larger crystals of MFI zeolite are observed (see figure below right). Although the possibility for controlling the overgrowth of zeolites has clearly been demonstrated, the opportunity for improvement is huge. It can only be successful, however, if combined with a molecular-scale understanding of the heterostructural interconnections between substrate and zeolite.

MFI zeolites on layered titanosilicates


Ligand dynamic effect on phase and morphology control of hexagonal NaYF4
Suli Wu, Ye Liu, Jie Changa and Shufen Zhang 
CrystEngComm, 2014, DOI10.1039/C4CE00109E

It is well accepted that the adsorption of stabilizing ligands at the surface of nuclei dramatically influences the growth habit of inorganic nanocrystals. The organic–inorganic interface present in these systems is the key to the synthesis of morphology controlled nanocrystals. Ligands can selectively adsorb onto particular facets hindering the growth in the direction perpendicular to that facet. However, the adhesion energy of the ligands should be adjusted to allow dynamic adsorption-desorption during nanoparticle growth, as demonstrated in the past for the synthesis of quantum dots. More importantly, it has also been demonstrated that, for the same functional group, the dynamic effect on the surface of quantum dot nanocrystals is significantly influenced by the ligand chain length. In this article, the authors investigate the effect of the alkyl chain length of carboxylic acid ligands on the growth of NaYF4 nanocrystals. The much more mobile hexanoic acid (HA) does not effectively passivate the {001} facets leading to rod-shape nanoparticles. With longer alkyl chains ligands, the growth along the c-axis is decreased (see figure below) and the morphology can be almost continuously tuned from rods to very thin disk-shaped crystals. The authors attribute such precise morphology control to the different ligand dynamic as, for longer alkyl chain ligands, the tendency of leaving the (001) crystal surfaces decreases leading to a lower growth on the [001] direction.

hexagonal NaYF4


Nicola PinnaNicola Pinna studied physical chemistry at the Université Pierre et Marie Curie (Paris). He received his Ph.D. in 2001 and in 2002 moved to the Fritz Haber Institute of the Max Planck Society (Berlin). In 2003, he joined the Max Planck Institute of Colloids and Interfaces (Potsdam) before moving to the Martin Luther University, Halle-Wittenberg, as an Assistant Professor of Inorganic Chemistry in 2005. From March 2006 to June 2012 he was researcher at the Department of Chemistry and CICECO of the University of Aveiro and from September 2009 to June 2012 he was also Assistant Professor at the school of chemical and biological engineering Seoul National University. In July 2012 he joined the Department of Chemistry of the Humboldt University in Berlin. His research activity is focused on the development of novel routes to nanostructured materials, their characterization, and the study of their physical properties.

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Crystal structures unpacked

Written by Hamish Crawford for Chemistry World

A researcher in the UK has shed new light on which interactions are important in the packing of crystal structures.1

Robin Taylor from the Cambridge Crystallographic Data Centre (CCDC) analysed the line-of-sight interactions between the most common elements found in organic crystal structures. He found that the probability of an interaction taking place boils down to the exposed surface area an atom presents. With 137,560 appropriate crystals available from the Cambridge Structural Database, and the inclusion of several statistical considerations, Taylor was able to keep potential sources of uncertainty to a minimum.

Interested? If so, read the full article at Chemistry World.

Interactions may be longer than the sum of Van der Waals radii yet still play a significant stabilising role

Interactions may be longer than the sum of Van der Waals radii yet still play a significant stabilising role

 The original article can be accessed below:

Which intermolecular interactions have a significant influence on crystal packing?
Robin Taylor
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00452C

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How to print a crystal in 3D

Written by Elisabeth Ratcliffe for Chemistry World

Rather than looking at a crystal on a screen, print it out and hold it in your hand

Scientists in the US have devised a method for printing three dimensional models of crystals using a 3D printer, the original CIF file and freely available software that can be run on standard operating systems.

Crystallographers like to picture complex crystal structures in three dimensions. Many use software that allows them to visualise the structures in a virtual space, but a better option would a physical model that you could hold in your hand.

Interested? Read the full article at Chemistry World.

The original article can be read below:

How to Print a Crystal Structure Model in 3D
Teng-Hao Chen, Semin Lee, Amar H Flood and Ognjen Miljanic  
CrystEngComm, 2014, Accepted Manuscript
DOI: 10.1039/C4CE00371C

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HOT articles for April

Modulating the solubility of sulfacetamide by means of cocrystals
N. Rajesh Goud, Ronaq Ali Khan and Ashwini Nangia
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00103F

 

Graphical Abstract

Free to access until 23rd May 2014


Nucleation and crystal growth of amorphous nilutamide – unusual low temperature behavior
Niraj S. Trasi and Lynne S. Taylor
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00118D

Graphical Abstract

Free to access until 15th May 2014


Tröger’s base quasiracemates and crystal packing tendencies
Jacob T. Cross, Nicholas A. Rossi, Mateusz Serafin and Kraig A. Wheeler
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C4CE00323C

Graphical Abstract

Free to access until 15th May 2014


When two symmetrically independent molecules must be different: “Crystallization-induced diastereomerization” of chiral pinanyl sulfone
Olga A. Lodochnikova, Valeriya A. Startseva, Liliya E. Nikitina, Andrei V. Bodrov, Alexander E. Klimovitskii, Evgenii N. Klimovitskii and Igor A. Litvinov
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C3CE42642D   

Graphical Abstract

Free to access until 15th May 2014


Pressure-induced isostructural phase transition of a metal–organic framework Co2(4,4′-bpy)3(NO3)4·xH2O
Mi Zhou, Kai Wang, Zhiwei Men, Chenglin Sun, Zhanlong Li, Bingbing Liu, Guangtian Zou and Bo Zou
CrystEngComm, 2014, Advance Article
DOI: 10.1039/C3CE42607F

Graphical Abstract

Free to access until 15th May 2014

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Improving the solubility of the drug furosemide

Furosemide is a loop diuretic (a ‘water pill’) used to treat congestive heart failure, oedema and sometimes hypertension.  It can also be used to reduce bleeding in horses during horseracing and is banned from use for this purpose in the UK. The bioavailability of the drug when taken orally is limited by the relatively low solubility. 

Formation of co-crystals with the co-formers caffeine or cytosine improves solubility (by 6 or 11 times) but the co-crystals suffer from low stability so are not suitable for pharmaceutical use.

A new paper takes a different approach, using salt formation as an alternative to co-crystal formation. Sodium and potassium salts of furosemide were prepared and their solubilities and stabilities assessed.  The solubility of the sodium salt (furo-Na-trihydrate) was over 4000 times higher than that of the free drug, while the potassium salt (furo-K-monohydrate) was over 10000 times more soluble.

Both salts show improved stability compared to the co-crystals – at 40 °C and 75% humidity furo-Na-trihydrate is stable for 2 weeks and furo-K-monohydrate is stable for 1 week.

Improving solubility of the drug furosemide

The authors conclude that the low cost of preparation and the enhanced solubility and stability of the salts merits their consideration for use in oral drug formulations.

For more information see the paper:

High solubility crystalline hydrates of Na and K furosemide salts
U. B. Rao Khandavilli, Swarupa Gangavaram, N. Rajesh Goud, Suryanarayan Cherukuvada, S. Raghavender, Ashwini Nangia, Sulur G. Manjunatha, Sudhir Nambiar and Sharmistha Pal
CrystEngComm, 2014, DOI: 10.1039/C3CE42347F

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Gwenda KydGwenda Kyd has a PhD in metallocarborane chemistry from the University of Edinburgh. Other research work includes the spectroscopic study of the structure of glasses and organometallic electron-transfer reactions and the preparation of new inorganic phosphors. Currently, she is writing a book on chemicals from plants

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