Use Your Eyes: A simple test for E. Coli

Polly-Anna Ashford is a guest web writer for Analyst. She is currently a PhD student at the University of East Anglia, UK.

Detection of E. coli in Ringer's solution

Detection of E. coli in Ringer's solution

Sophisticated analytical tests producing a readout which can be interpreted by the naked eye, or by image editing software, are becoming increasingly popular.  They offer a low cost alternative to tests requiring expensive equipment and highly trained analysts. Jürgen Popp and colleagues from the Friedrich Schiller University and the Institute of Photonic Technology in Jena, Germany, have developed a new detection method for DNA which provides a distinctive colour change in the case of a positive result.

The bacterial contamination of intravenous fluids in hospitals is a significant concern in modern medicine, so Popp and his team chose the detection of E. Coli in Ringer’s solution as the first test for their assay. The technique uses surface-modified magnetic beads which can bind complementary target DNA by hybridisation. A silver deposition kit provides the visual colour change: for a positive result, silver nanoparticles are generated by enzymatic silver deposition, turning the sample black. As well as being an inexpensive and convenient qualitative test, a quantitative result can be found by analysing a digital photograph of the colour change in standard image editing software.

To read the full article, please cick on the link below. The paper will be free to read for the next three weeks.

Convenient detection of E. coli in Ringer’s solution
Martha Schwarz, Susanne Pahlow, Thomas Bocklitz, Carolin Steinbrücker, Dana Cialla, Karina Weber and Jürgen Popp
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN01240A

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BODIPY-Based Probe for HClO Imaging: Resolving the Paradox of Detection?

Pui Sai Lau is a guest web writer for Analyst. She is currently a PhD student at McMaster University, Hamilton, ON, Canada.

BODIPY-Based Probe for HClO Imaging

BODIPY-Based Probe for HClO Imaging

Detection of suitable biomarkers of disease is critical for medical diagnosis. However, detection becomes a paradoxical challenge when the biomarker is naturally found in healthy individuals. This is the case for the biomarker hypochlorous acid (HClO), a reactive oxygen species that plays an essential role in maintaining a healthy immune system under normal conditions. Yet, when optimal levels of HClO cannot be maintained by the body, cellular functions become disrupted and this can result in diseases such as atherosclerosis, arthritis, and cancer. Consequently, HClO requires medical monitoring, particularly in the mitochondria where a high concentration tends to reside. To help distinguish between healthy and diseased states, the ideal biosensor must provide fast response, high selectivity, high sensitivity and mitochondrial permeability.

To address this challenge, Xiaojun Peng and colleagues from the Dalian University of Technology in China have created a fluorescent imaging probe to detect HClO by localizing to mitochondria in live cells. Their probe makes use of boron dipyrromethene (BODIPY) dye for its outstanding fluorescent properties. Incorporation of an oxime group onto the BODIPY scaffold allows the tuning of fluorescence to an on/off state depending on the presence/absence of HClO, respectively. Lastly, incorporation of a triphenylphosphine group onto BODIPY provides the localization signal to the mitochondria. Learn all the details of this exciting new discovery by accessing the link below:

 

A highly specific BODIPY-based probe localized in mitochondria for HClO imaging
Guanghui Cheng, Jiangli Fan, Wen Sun, Kun Sui, Xin Jin, Jingyun Wang and   Xiaojun Peng  
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN01152F

This pap[er will be free to read for the next three weeks. Let us know what your thoughts are by leaving a comment!

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3rd Workshop on Microfludics, Sao Paulo, Brazil

The 3rd Workshop on Microfluidics was held at the National Center for Research on Energy and Materials (CNPEM) in Campinas, Sao Paulo (Brazil) from July 18-19, 2013. Since 2011, the workshop has brought together young students, researchers and companies from different states of Brazil to discuss topics related to the fundamentals, fabrication technologies, innovations and applications on microfluidic science. In this third edition, the Workshop was attended by around 160 people from Universities (66%), research centers (23%) and companies (11%). As already observed in previous years, the Workshop has demonstrated the state of the art of microfluidics in Brazil. This field has been spread out around different regions of the Brazil with great contributions on fabrication technologies well as innovative developments and applications on microfluidic platforms. For the coming years, we hope that the Workshop will continue to receive great attention from the community in order to contribute to the scientific growth related to the microfluidics in Brazil.

During the Workshop, we were pleased to select the presentation “Microfluidic formation of pDNA/cationic nonviral nanocarriers for in vitro gene delivery” to receive the RSC Publishing Prize for the best presentation. The work was presented by the graduated student Tiago A. Balbino and was supervised by Dr. Lucimara G. de La Torre, from the School of Chemical Engineering, State University of Campinas (UNICAMP). The work describes the microfluidic formation of nonviral systems for delivery of plasmid DNA (pDNA) using a hydrodynamic flow-focusing microfluidic device where the complexation between the pDNA and three different cationic nonviral nanocarriers: cationic liposomes, poly(ethylene imine), and peptide with nuclear localization signals were demonstrated.
On behalf of the organizing committee, I would like to thank the support received from the Royal Society of Chemistry.

Angelo Luiz Gobbi

Microfabrication Laboratory – LNNano


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ARF 2013 Poster Prizes

Helen Robinson, Deputy Editor Rebecca Brodie, and Arrandeep Basra at the Analytical Research Forum

At the Analytical Research Forum last month, held at GlaxoSmithKline and the University of Hertfordshire, UK, there were two poster prizes awarded by Analyst and Analytical Methods. We are pleased to announce that the winners were Helen Robinson, from the University of York, and Arrandeep Basra, from the University of Nottingham.

In Helen’s poster entitled “Capturing peptides on gold using self-assembled monolayers (SAMs) for MALDI-MS analysis“, she describes a developed technique to capture and label protein digests directly on a gold-coated MALDI chip, followed by direct analysis from the chip.

Arrandeep’s poster was entitled “Size-tunable biodegradable polymeric nanoparticles for controlled drug delivery“. In his poster he describes a study on the formation of nanoparticles and the results from adjusting the formulation parameters to get a range of different sizes and drug loading capabilities.

The winners were selected by a panel of judges and the prizes were awarded by Analyst and Analytical Methods Deputy Editor Rebecca Brodie. The prizes included a certificate, free electronic journal subscription, and a book from the RSC catalogue. Congratulations to Helen and Arrandeep!

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HOT Articles in Analyst

Check out the latest HOT articles just published in Analyst! They are all free for you to read for the next three weeks. Enjoy!

A protein nanofiber hydrogel for sensitive immunoassays
Dae-Sung Lee, Jin-Seung Park, Eun Jung Lee, Hyun Jin Kim and Jeewon Lee
Analyst, 2013,138, 4786-4794
DOI: 10.1039/C3AN00564J

Anodic stripping voltammetric determination of cadmium using a “mercury free” indium film electrode
Sukeri Anandhakumar, Jayaraman Mathiyarasu and Kanala Lakshimi Narasimha Phani
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN01070H

Alteration of Asian lacquer: in-depth insight using a physico-chemical multiscale approach
Anne-Solenn Le Hô, Chloé Duhamel, Céline Daher, Ludovic Bellot-Gurlet, Céline Paris, Martine Regert, Michel Sablier, Guilhem André, Jean-Paul Desrochese and   Paul Dumasf
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN00608E

Luminescence lifetime-based capillary oxygen sensor utilizing monolithically integrated organic photodiodes
Bernhard Lamprecht,  Andreas Tschepp, Merima Cajlakovic, Martin Sagmeister, Volker Ribitsch and Stefan Köstler
Analyst, 2013, Accepted Manuscript
DOI: 10.1039/C3AN00208J

Dual detection of cancer biomarker CA125 using absorbance and electrochemical methods
Israa Al-Ogaidi, Zoraida P. Aguilar, Savan Suri, Honglei Gou and Nianqiang Wu
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN00668A

Desorption electro-flow focusing ionization of explosives and narcotics for ambient pressure mass spectrometry
Thomas P. Forbes, Tim M. Brewer and Greg Gillen
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN01164J

High-throughput analysis of drugs in biological fluids by desorption electrospray ionization mass spectrometry coupled with thin liquid membrane extraction Cecilie Rosting, Stig Pedersen-Bjergaard, Steen Honoré Hansen and Christian Janfelt
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN00544E

Multifunctional carbon nanoelectrodes fabricated by focused ion beam milling
Rahul Thakar, Anna E. Weber, Celeste A. Morris and Lane A. Baker
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN01216F

Facile synthesis of quantum dots/mesoporous silica/quantum dots core/shell/shell hybrid microspheres for ratiometric fluorescence detection of 5-fluorouracil in human serum
Rijun Gui, Ajun Wan and Hui Jin
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN01089A

Optimization of microfluidic PET tracer synthesis with Cerenkov imaging
Alex A. Dooraghi, Pei Y. Keng, Supin Chen,  Muhammad R. Javed, Chang-Jin “CJ” Kim, Arion F. Chatziioannou and R. Michael van Dam
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN01113E

A label-free and colorimetric turn-on assay for coralyne based on coralyne-induced formation of peroxidase-mimicking split DNAzyme
Ting Hou, Xiuzhong Wang, Xiaojuan Liu, Shufeng Liu, Zongfeng Du and Feng Li
Analyst, 2013,138, 4728-4731
DOI: 10.1039/C3AN01024D

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The third reason to attend HPLC 2013 – Hobart

HPLC 2013 – Hobart Draft Program is now available on the web!

The HPLC 2013 – Hobart conference is happy to announce that the draft program is now available for view on the website. Click here to view the program.

Register now to secure the reduced registration rate!
For more information on registration please visit the website http://www.hplc2013-hobart.org/

The deadline for submission on poster abstracts is 18th October 2013. Please click here to submit your poster for HPLC 2013 –Hobart

 

Exciting educational opportunities offered at HPLC 2013 – Hobart!

World experts will deliver short courses and tutorial. Attendees can register for these on the conference web site  http://www.hplc2013-hobart.org/

Take the opportunity to learn from the best in the world!

TUTORIALS

Microfluidic chemical separations devices
UHPLC
Chiral separations
Column efficiency
System performance
Role of the stationary phase in HPLC
Environmental analysis
The nL lab: using droplets in analytical and separation science
Electroseparations

SHORT COURSES

Advanced HPLC method development
 LC-MS(/MS)
Polymer monoliths

 

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A fantastic voyage

Joseph Wang is a Distinguished Professor and Vice Chair of Nanoengineering at the University of California, San Diego in the US. His research looks at the rapidly developing field of nanobioelectronics which aims to integrate nano- and biomaterials with electronic transducers. He took some time out from the Faraday Discussion on Electroanalysis at the Nanoscale, held at the University of Durham, UK, at the beginning of July, to talk to Rebecca Brodie about his research.

Who or what inspired you to become a scientist in the first place?

I’ve always been interested in science. More biology and medicine in the early days but it was mainly an interest in medicine and biomedicine. After that I became a chemist, then an electrochemist with my PhD. It’s really been a continuous evolution with my interests moving in new directions for almost three decades now.

To read the full article, please visit Chemistry World.

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Mercury 2013 – RSC Award and themed collection

RSC journals were delighted to support the recent International Conference on Mercury as a Global Pollutant which was held in Edinburgh, UK. Congratulations to James Goacher from University of Western Ontario in London, Canada, who was awarded the RSC Best Student Presentation Award in the field of analytical methodology, environmental monitoring and assessment.

James is currently studying at the University of Western Ontario in London, Canada. He began his academic journey by completing a fourth year honours thesis project in the same field and went on to win best thesis presentation for his work. James then began an MSc to focus on historical trends in mercury accumulation in remote peatlands of far Northern Ontario in the Hudson Bay Lowland. This environmentally sensitive area is expected to be subject to some of the greatest climate related changes in the coming future and James feels strongly that area needs to be well understood and protected for its inherent value. By better understanding historical mercury trends in the natural environment, James hopes to tease apart current anthropogenic influences on the mercury cycle so that realistic emissions targets can be set. Future plans for James are still uncertain, but he expects his passion for the environment will lead him on to improve Canadian environmental policy and practises.

We are also pleased to announce that the  following RSC journals will be publishing a cross journal web-themed issue relating to papers presented at Mercury 2013:

Analytical Methods  – Early applied demonstrations of new analytical methods with clear societal impact

JAAS  – Innovative research on the fundamental theory and application of spectrometric techniques

Metallomics  – A global approach to metals in biology

Environmental Science: Processes and Impacts  – advancing our understanding of environmental hazards, processes, and impacts, and offer solutions to today’s and future problems, formerly the  Journal of Environmental Monitoring,

RSC Advances  – An international journal to further the chemical sciences

Authors from the participating sessions are invited to submit to the journal most suitable for their work. The relevant articles from the conference will be published in those journals and then collected together as a joint web collection, as a permanent record of the conference. Articles submitted to the participating journals will be reviewed in the usual manner, and also appear in a normal issue both online and in print.

The submission deadline for our web theme will be September 24th 2013 with the view of final publication in January 2014. Specific information on the scope of each journal and author submission instructions can be found on the journal homepages.

We look forward to receiving your submission!

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Analysis in gases and liquids using quantum cascade lasers Themed Issue: Submit NOW!

Soon we will be publishing a themed issue of Analyst on

Analysis in gases and liquids using quantum cascade lasers

We aim to cover a wide range of aspects of this exciting area of research by highlighting analytically important developments and novel applications. 
This issue is guest edited by Boris Mizaikoff, (University of Ulm) and Bernhard Lendl (Vienna University of Technology).

 Submit your work today

 All articles will be peer-reviewed, and to be suitable for publication, must meet the usual quality and significance standards of the journal. Please indicate in your covering letter that your article is to be considered for the Analysis in gases and liquids using quantum cascade lasers themed issue.

Email us at ANALYST-RSC@rsc.org for more information

 

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In the Blood: “Smelling” Bacteria in Cases of Sepsis

Polly-Anna Ashford is a guest web writer for Analyst. She is currently a PhD student at the University of East Anglia, UK.

Rapid detection and identification of bacteria in sepsis

Rapid detection and identification of bacteria in sepsis

Infections of the blood are a major cause of death, even in countries where antibiotics are widely available. A large hurdle to successful treatment of this type of infection is the identification of the responsible bacteria, which can take several days. Clinicians often resort to the use of broad spectrum antibiotics, which encourages the rise of antibiotic resistant bacteria in the population.

In this collaborative work, researchers led by James Carey at the National University of Kaohsiung, Taiwan, and David Engebretson of Oklahoma City University in the United States, report the design and testing of a colorimetric sensor for bacterial identification. The process simultaneously cultures the bacteria and analyses the unique fingerprint of gases and metabolites produced. The single-step testing kit is automated and disposable, unlike current methods which require skilled technicians, and is so far able to distinguish between eight of the most common pathogens.

By combining the detection and identification of bacteria, the authors are confident that this new technology will prove to be a major step forward in the treatment and outcome of sepsis in patients.

To read the full paper, free for you for the next three weeks, please access the link below:

Single step, rapid identification of pathogenic microorganisms in a culture bottle
Yu W. Chu, Bo Y. Wang, David A. Engebretson and   James R. Carey
Analyst, 2013, Advance Article
DOI: 10.1039/C3AN01175E

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