Author Archive

HOT: self-cleaving chemical nucleases with unprecedented in vitro cytotoxicity

A challenge for the development of redox active metal-based chemotherapeutics is producing chemical nucleases capable of self-cleaving, so that they do not require a reducing agent to initiate DNA cleavage (which obviously limits their viability in vivo).  In this HOT paper water soluble Cu2+ and Mn2+ bis-phenanthroline octanedioate complexes have been developed which are capable of doing just that – with very promising results.

The self-cleaving chemical nucleases have been developed by Andrew Kellett and Michael Devereux from Dublin Institute of Technology and colleagues from the National University of Ireland, DuPont and Penn State University.  The complexes show nano and picomolar in vitro cytotoxicity towards cancer cells and better drug tolerance in vivo than cisplatin.

To find out more, download the paper. This article is currently free to access and is on the cover of Issue 7.

Water-soluble bis(1,10-phenanthroline) octanedioate Cu2+ and Mn2+ complexes with unprecedented nano and picomolar in vitro cytotoxicity: promising leads for chemotherapeutic drug development
Andrew Kellett, Mark O’Connor, Malachy McCann, Orla Howe, Alan Casey, Pauraic McCarron, Kevin Kavanagh, Mary McNamara, Sean Kennedy, Donald D. May, Philip S. Skell, Denis O’Shea and Michael Devereux
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C0MD00266F

For the authors’ previous work why not also see:

Bis-phenanthroline copper(II) phthalate complexes are potent in vitro antitumour agents with ‘self-activating’ metallo-nuclease and DNA binding properties
Andrew Kellett, Mark O’Connor, Malachy McCann, Mary McNamara, Patrick Lynch, Georgina Rosair, Vickie McKee, Bernie Creaven, Maureen Walsh, Siobhan McClean, Agnieszka Foltyn, Denis O’Shea, Orla Howe and Michael Devereux
Dalton Trans., 2011, 40, 1024-1027
DOI: 10.1039/C0DT01607A

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Are pyridazines privileged structures?

Camille Wermuth, Prestwick Chemical Inc., France, presents an interesting account of the use, and potential, of pyridazine scaffolds in medicinal chemistry in this hot review.  He suggests that the pyridazine scaffold is a privileged structure, i.e. it is capable of providing useful ligands for more than one receptor, and has several advantages over the commonly used phenyl ring.

This article is part of the collection: 21st International Symposium on Medicinal Chemistry (EFMC-ISMC 2010) and is free to access:

Are pyridazines privileged structures?
Camille G. Wermuth
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C1MD00074H

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Review: latest information on MDMX – the alternative regulator of p53

The p53 signalling pathway is responsible for regulating the cell cycle, initiating DNA repair and triggering apoptosis where necessary.  Its crucial importance can clearly be seen by the fact that about half of human cancers contain alterations in the p53 pathway.  The proteins MDM2 and MDMX (a.k.a. MDM4) negatively regulate p53, and altered levels of these proteins are often deemed responsible for p53 alterations.  As a result MDM2 has been extensively studied, but few MDM2 inhibitors have made it as far as clinical trials.

In this review Antonio Macchiarulo (University of Perugia) and team have sought to pull together recent breakthroughs on the lesser studied MDMX.  MDMX is structurally similar to MDM2, but interestingly cells appear unable to compensate for the loss of one negative regulator with the other – they regulate non-overlapping functions.  The review highlights new structural information available for MDMX and recent studies on the potential of dual MDMX and MDM2 inhibitors.  The conclusion – we need to develop more small molecules selective for MDMX to further understand and validate its potential as a therapeutic target.

This interesting article is on the cover of our latest issue – Issue 6 – and is currently free to access:

Expanding the horizon of chemotherapeutic targets: From MDM2 to MDMX (MDM4)
Antonio Macchiarulo, Nicola Giacchè, Andrea Carotti, Fabiola Moretti and Roberto Pellicciari
Med. Chem. Commun., 2011, 2, 455-465
DOI: 10.1039/C0MD00238K

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HOT: drugs that go beyond the rule of five – or do they?

Lipinski’s rule of five is probably one of the first principles taught to a medicinal chemist, as it defines the chemical space likely to yield a successful oral drug. However, in recent years some drugs have moved beyond traditional rule of five space in order to access alternative or challenging targets.

In this HOT paper David S. Millan and colleagues at Pfizer R&D explore the influence of intramolecular hydrogen bonding on the membrane permeability and bioavailability of some of these drugs.  By determining the propensity of molecules to form intramolecular  hydrogen bonds they are able to revise previous assumptions about where certain molecules sit in chemical space.  They find that when hydrogen bonding is taken into account these drugs sit much closer to rule of five space – thereby explaining the successful absorption of drugs that otherwise violate rule of five principles.

To read more on this interesting new tool for predicting intramolecular hydrogen bonding, download the article which is currently free to access:

Intramolecular hydrogen bonding to improve membrane permeability and absorption in beyond rule of five chemical space
Alexander Alex, David S. Millan, Manuel Perez, Florian Wakenhut and Gavin A. Whitlock
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C1MD00093D

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HOT: first example of an organometallic osmium complex with significant anti-cancer activity

The majority of therapeutics clinically available for cancer treatment are platinum-based and work via a DNA alkylation mechanism that leads to cell apoptosis.  But a number of cancers are resistant to apoptosis and not treatable with platinum-based drugs.

In this paper Peter Sadler (University of Warwick), Steve Shnyder (University of Bradford) and teams have developed an organometallic half-sandwich osmium complex that displays significant anti-cancer activity with negligible toxicity in vivo. Osmium is also a platinum group metal but has a completely different mode of action and appears to operate via redox mechanisms – making these complexes candidates for further investigation and potentially clinical trials.

Read more about this exciting find here – the article is currently free to access:

Anti-colorectal cancer activity of an organometallic osmium arene azopyridine complex
Steve D. Shnyder, Ying Fu, Abraha Habtemariam, Sabine H. van Rijt, Patricia A. Cooper, Paul M. Loadman and Peter J. Sadler
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C1MD00075F

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HOT: something old, something new – combining traditional Chinese medicine and computational chemical biology

There are a vast number biologically active natural products out there with the potential to cure any number of rather nasty diseases.  But searching for them and identifying their therapeutic targets can seem like a bewilderingly large task.  In this interesting paper Weidong Zhang and colleagues from several institutes in Shanghai have combined knowledge from traditional Chinese medicine with computational chemical biology to rapidly identify novel targets for natural products derived from plants.

The authors selected Bacopa monnieri (L.) Wettst (BMW) and Daphne odora Thunb. var. marginata (DOT) – which are used in traditional medicine for the treatment of diabetes and inflammation – and screened 19 compounds isolated from the plants against a potential drug target database using a reverse docking approach.  Based on these results and the clinical indication of the plants the DPP-IV protein (a therapeutic target for type II diabetes) was chosen for experimental validation.  When tested in vitro, 5 of the 19 compounds showed moderate inhibition of DPP-IV.  Then, from these five compounds analogues from an in-house library were screened, almost half of which again showed the ability to moderately inhibit the protein.

The authors emphasise that further work must be done to identify the synergistic pathways that result in the overall efficacy of traditional Chinese medicinal treatments, but this paper does demonstrate how it is possible to use natural products derived from clinically effective, but poorly understood, traditional treatments as a starting point for rapidly and successfully identifying new therapeutic targets.

Fast and effective identification of the bioactive compounds and their targets from medicinal plants via computational chemical biology approach
Shoude Zhang, Weiqiang Lu, Xiaofeng Liu, Yanyan Diao, Fang Bai, Liyan Wang, Lei Shan, Jin Huang, Honglin Li and Weidong Zhang
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C0MD00245C

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HOT article: fragment screening for nicotinic acetylcholine receptors

Finding ligands to selectively bind to nicotinic acetylcholine receptor family of ligand gated ion channels is challenging due to the diversity of receptor subtypes, but ligands for the α7 subtype in particular could lead to new therapies for brain disorders such as schizophrenia and Alzheimer’s disease.

To screen for potential ligands Jeroen Kool (Leiden/Amsterdam Center for Drug Research) and colleagues recently developed an online fluorescence enhancement assay for the water-soluble acetylcholine binding protein (AChBP) – a model protein for the binding domain of α7 nicotinic acetylcholine receptors.  Using the related proteins Ls and Ac-AChBP  they sifted through in-house fragment libraries, discovering that Ls-AChBP is a better template for fragment screening and accurate, rapid hit exploration is possible using single point injections in the 96-well format.  They also produced an optimised hit with mM affinity for the α7 nicotinic acetylcholine receptor.

The authors hope that this technology will find applicability elsewhere – as it only requires a water-soluble protein and a good fluorescence enhancement tracer ligand.

Why not download the article and see for yourself – it’s currently free to access:

Online parallel fragment screening and rapid hit exploration for nicotinic acetylcholine receptors
Gerdien E. de Kloe, Jeroen Kool, Rene van Elk, Jacqueline E. van Muijlwijk-Koezen, August B. Smit, Henk Lingeman, Hubertus Irth, Wilfried M. A. Niessen and Iwan J. P. de Esch
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C1MD00031D

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HOT article: potential new G-quadruplex ligands

Finding ligands capable of stabilising G-quadruplex DNA structures has been a hot topic in medicinal chemistry for a number of years now, due to their potential as anti-cancer treatments.  But despite intensive research G-quadruplex ligands are yet to appear on the drug market-due to various problems with toxicity and efficacy-requiring the investigation of new, effective compounds.

Adam Le Gresley and colleagues from Kingston University have therefore investigated 8 anthracene-9-monoacrylamides and anthracen-9,10-bisacrylamides, which fit the criteria that has been identified for successful G-quadruplex binding.  They were surprised that neither the synthesis nor biological evaluation of their chosen diacrylamides had previously been reported, and so characterise them fully here.  They found that one class of ligand tested possesses anti-cancer activity, based on promotion of quadruplex DNA formation observed in solution by NMR, coupled with ‘compelling’ fluorescence data and initial biological testing. The group are now undertaking further investigations to better understand the activity of the diacrylamides.

Read more about this new class of potential G-quadruplex ligands – the paper is currently free to access:

Diacrylamides as selective G-quadruplex ligands in in vitro and in vivo assays
Adam Le Gresley, Ammara Abdullah, Deepak Chawla, Pratchi Desai, Uttam Ghosh, Uma Gollapalli, Munazza Kiran, Shehri Lafon and Alex Sinclair
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C1MD00020A

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HOT article: anionic gold nanoparticles for multi-strain flu virus inhibition

One of the difficulties in vaccinating against annual flu pandemics is the myriad of different virus strains and the ability of the virus to rapidly mutate – which occurs so much faster than vaccine development.

Excitingly, however, Aharon Gedanken from Bar-Ilan University and colleagues from the Israeli Ministry of Health have developed a method of virus inhibition effective against several different strains, including H1N1 (swine flu). By using gold nanoparticles with anionic surface functional groups mercaptoethanesulfonate or mercaptosuccinic acid, the researchers were able to inhibit infection in MDCK cells, with no cytotoxic side effects.  They believe the mode of action is due to the nanoparticles preventing the virus from attaching to the cell surface, but further research is currently under way to determine the exact mechanism.

This HOT article is currently free to access – download it today!

Effective multi-strain inhibition of influenza virus by anionic gold nanoparticles
Matias Sametband, Sourabh Shukla, Tal Meningher, Shira Hirsh, Ella Mendelson, Ronit Sarid, Aharon Gedanken and Michal Mandelboim
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C0MD00229A

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HOT perspective: drug discovery – overweight and in need of a psychologist?

In this interesting review Michael Hann from GSK gives his take on why it is becoming harder and harder to bring drugs to market.  The finger of blame, he suggests, points not just towards regulatory hurdles but to our ideas about the drug discovery process itself.

As well as examining the causes of failure in drug discovery in terms of lead candidate properties, he also takes a look at the behavioural psychology of the medicinal chemist.  Hann suggests that the quest for the potency borders on addiction, and that while potency is an important aspect of drug design, it should not necessarily be the overarching goal.  His reason – that the search for potency can lead to molecules that are too large and liphophilic to make it to market.  He ironically coins the term ‘molecular obesity‘ to describe the risk that this presents to the fitness of lead compounds.

Whether you agree with Hann on the cause of failure or not, the 95% attrition rate of pharma R&D is indisputable; it would appear that drug discovery is in need of a check-up.

Download this though-provoking review today – it’s free to access until April:

Molecular obesity, potency and other addictions in drug discovery
Michael M. Hann
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C1MD00017A

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