Archive for March, 2011

Top ten most accessed articles in February

This month sees the following articles in MedChemComm that are in the top ten most accessed:- 

Impact of ion class and time on oral drug molecular properties 
Paul D. Leeson, Stephen A. St-Gallay and Mark C. Wenlock 
Med. Chem. Commun., 2011, 2, 91-105, DOI: 10.1039/C0MD00157K, Review 

The importance of solvation in the design of ligands targeting membrane proteins 
Angel González, Marta Murcia, Bellinda Benhamú, Mercedes Campillo, María L. López-Rodríguez and Leonardo Pardo 
Med. Chem. Commun., 2011, 2, 160-164, DOI: 10.1039/C0MD00258E, Concise Article 

Chemical space as a source for new drugs 
Jean-Louis Reymond, Ruud van Deursen, Lorenz C. Blum and Lars Ruddigkeit 
Med. Chem. Commun., 2010, 1, 30-38, DOI: 10.1039/C0MD00020E, Review 

Novel, unifying mechanism for aromatic primary-amines (therapeutics, carcinogens and toxins): electron transfer, reactive oxygen species, oxidative stress and metabolites 
Peter Kovacic and Ratnasamy Somanathan 
Med. Chem. Commun., 2011, 2, 106-112, DOI: 10.1039/C0MD00233J, Review 

Boronic acids in medicinal chemistry: anticancer, antibacterial and antiviral applications 
Paul C. Trippier and Christopher McGuigan 
Med. Chem. Commun., 2010, 1, 183-198, DOI: 10.1039/C0MD00119H, Review 

The discovery of a novel prototype small molecule TLR7 agonist for the treatment of hepatitis C virus infection 
David C. Pryde, Thien-Duc Tran, Peter Jones, Gemma C. Parsons, Gerwyn Bish, Fiona M. Adam, Mya C. Smith, Donald S. Middleton, Nick N. Smith, Frederick Calo, Duncan Hay, Michael Paradowski, Katie J. W. Proctor, Tanya Parkinson, Carl Laxton, David N. A. Fox, Nigel J. Horscroft, Giuseppe Ciaramella, Hannah M. Jones, Jonathan Duckworth, Neil Benson, Anthony Harrison and Rob Webster 
Med. Chem. Commun., 2011, 2, 185-189, DOI: 10.1039/C0MD00197J, Concise Article 

Preparation of blood-brain barrier-permeable paclitaxel-carrier conjugate and its chemotherapeutic activity in the mouse glioblastoma model 
Juyoun Jin, Woo Sirl Lee, Kyeung Min Joo, Kaustabh K. Maiti, Goutam Biswas, Wanil Kim, Kyong-Tai Kim, Se Jeong Lee, Kang-Ho Kim, Do-Hyun Nam and Sung-Kee Chung 
Med. Chem. Commun., 2011, Advance Article, DOI: 10.1039/C0MD00235F, Concise Article 

Structure-based design, synthesis, and profiling of potent and selective neuronal nitric oxide synthase (nNOS) inhibitors with an amidinothiophene hydroxypiperidine scaffold 
Guyan Liang, Kent Neuenschwander, Xin Chen, Linli Wei, Randall Munson, Gerardo Francisco, Anthony Scotese, Gregory Shutske, Mark Black, Sharkir Sarhan, Jason Jiang, Isabelle Morize and Roy J. Vaz 
Med. Chem. Commun., 2011, 2, 201-205, DOI: 10.1039/C0MD00255K, Concise Article 

Small molecule modulation of stem cells in regenerative medicine: recent applications and future direction 
Timothy E. Allsopp, Mark E. Bunnage and Paul V. Fish 
Med. Chem. Commun., 2010, 1, 16-29, DOI: 10.1039/C0MD00055H, Review 

Conformational effects on potency of thioimidazoles and dihydrothiazolines 
Roland Selig, Verena Schattel, Marcia Goettert, Dieter Schollmeyer, Wolfgang Albrecht and Stefan Laufer 
Med. Chem. Commun., 2011, Advance Article, DOI: 10.1039/C0MD00228C, Concise Article 

Why not take a look at the articles today and blog your thoughts and comments below. Fancy submitting an article to MedChemComm? Then why not submit to us today or alternatively email us your suggestions.

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HOT article: anionic gold nanoparticles for multi-strain flu virus inhibition

One of the difficulties in vaccinating against annual flu pandemics is the myriad of different virus strains and the ability of the virus to rapidly mutate – which occurs so much faster than vaccine development.

Excitingly, however, Aharon Gedanken from Bar-Ilan University and colleagues from the Israeli Ministry of Health have developed a method of virus inhibition effective against several different strains, including H1N1 (swine flu). By using gold nanoparticles with anionic surface functional groups mercaptoethanesulfonate or mercaptosuccinic acid, the researchers were able to inhibit infection in MDCK cells, with no cytotoxic side effects.  They believe the mode of action is due to the nanoparticles preventing the virus from attaching to the cell surface, but further research is currently under way to determine the exact mechanism.

This HOT article is currently free to access – download it today!

Effective multi-strain inhibition of influenza virus by anionic gold nanoparticles
Matias Sametband, Sourabh Shukla, Tal Meningher, Shira Hirsh, Ella Mendelson, Ronit Sarid, Aharon Gedanken and Michal Mandelboim
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C0MD00229A

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MedChemComm Issue 3 is here

Welcome to MedChemComm Issue 3!

In this new issue, you’ll find a new collection of exciting papers on medicinal chemistry research, which you can download for free!

This month’s menu includes:

The importance of solvation in the design of ligands targeting membrane proteins

Repairing faulty genes by aminoglycosides: Identification of new pharmacophore with enhanced suppression of disease-causing nonsense mutations

Synthesis and anti HSV-1 evaluation of novel indole-3,4-diones

Novel indolizine compounds as potent inhibitors of phosphodiesterase IV (PDE4): structure–activity relationship

Scaffold-hopping from aminoglycosides to small synthetic inhibitors of bacterial protein biosynthesis using a pseudoreceptor model

The discovery of a novel prototype small molecule TLR7 agonist for the treatment of hepatitis C virus infection

Synthesis and biological evaluation of novel ferrocenyl curcuminoid derivatives

Interactions of polysulfanes with components of red blood cells

Structure-based design, synthesis, and profiling of potent and selective neuronal nitric oxide synthase (nNOS) inhibitors with an amidinothiophene hydroxypiperidine scaffold

Carba-LNA modified siRNAs targeting HIV-1 TAR region downregulate HIV-1 replication successfully with enhanced potency

That is a great selection, isn’t it? We hope you enjoy it and you find it enlightening.

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HOT perspective: drug discovery – overweight and in need of a psychologist?

In this interesting review Michael Hann from GSK gives his take on why it is becoming harder and harder to bring drugs to market.  The finger of blame, he suggests, points not just towards regulatory hurdles but to our ideas about the drug discovery process itself.

As well as examining the causes of failure in drug discovery in terms of lead candidate properties, he also takes a look at the behavioural psychology of the medicinal chemist.  Hann suggests that the quest for the potency borders on addiction, and that while potency is an important aspect of drug design, it should not necessarily be the overarching goal.  His reason – that the search for potency can lead to molecules that are too large and liphophilic to make it to market.  He ironically coins the term ‘molecular obesity‘ to describe the risk that this presents to the fitness of lead compounds.

Whether you agree with Hann on the cause of failure or not, the 95% attrition rate of pharma R&D is indisputable; it would appear that drug discovery is in need of a check-up.

Download this though-provoking review today – it’s free to access until April:

Molecular obesity, potency and other addictions in drug discovery
Michael M. Hann
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C1MD00017A

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HOT: mending broken hearts – with water soluble flavonols

Current treatments for heart attacks usually involve restoring blood flow to the heart and and removing the blockage that caused it in the first place.     But what treatments are there for the oxygen-starved muscle? Well, currently, none.

The correct name for the damage caused to tissue by a lack of oxygen and nutrients is reperfusion injury, largely caused by the production of reactive oxygen species.  Naturally occurring flavonoids – antioxidants found in fruit, tea, wine and chocolate – have been shown to have a positive effect on cardiovascular health and have been highlighted as promising treatments for heart disease.   To date however, the poor aqueous solubility of the most promising flavonol candidates has prevented further therapeutic development – probably because the FDA has strong views on DMSO as an injecting solvent.

Now, researchers from Melbourne, Australia have synthesised water soluble prodrugs of some of those flavonols.  Owen Woodman and co-workers synthesised phosphate and hemiadipate derivatives of flavonol, 4′-hydroxyflavonol and 3′,4′-dihydroxyflavonol which were shown to significantly decrease reperfusion injury in two distinct animal models.  The group hopes this work will make a meaningful  step towards the clinical application of hydroxylated flavonols.

Read the full details of this interesting study online – the article is currently free to access:

Water soluble flavonol prodrugs that protect against ischaemia-reperfusion injury in rat hindlimb and sheep heart
Spencer J. Williams, Colleen J. Thomas, Mirna Boujaoude, Carlie T. Gannon, Shannon D. Zanatta, Bevyn Jarrott, Clive N. May and Owen L. Woodman
Med. Chem. Commun., 2011, Advance Article
DOI: 10.1039/C0MD00240B

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