Archive for the ‘News’ Category

Exciting new double xanthenium dyes

The world of organic dyes is extremely dynamic, and vast amounts of research are performed on all aspects of organic colorants. That said, the number of chromophores is very static, and has been for decades. Rarely is a completely new dye seen, most developments are perturbations of known dye structures. A very interesting perturbation of a xanthenium dye is reported in a recent paper by Kamino et al., where they have fused two cationic xanthenium systems into a single dye.

Table of contents imageThe new, extended or double, rhodamine dye shows interesting properties, as a consequence of the bulk of the molecular structure and the elongation and extension of the conjugated system. A small red-shift of the absorption maximum of 50 nm occurs, and the new molecular structure allows the xanthenium fluorophore to be strongly emissive in the solid state.
A consequence of fusing two rhodamines into a single molecule is the doubling of all charges. The new dye is a dication in its most potent form, a species that evidently is highly solvent sensitive. More interesting, two peripheral phenyl groups are present in the system. The short distance between these results in hindered rotation. Two different isomers, defined by the phenyl substituents, can be isolated and they have significantly different properties.
The new dyes, which have been synthesised and characterised by Kamino et al. are exciting, as they allow for the investigation of how an enlarged pi-system changes the optical properties. As well as how the phenyl group, present in all fluoresceins and rhodamines, can affect their performance as stains and labels for the biological and medical sciences. Thus providing a new handle in the search for new and optimised fluorescent dyes.

by Dr Thomas Just Sørensen

Check out this fascinating PCCP article now:

A red-emissive aminobenzopyrano-xanthene dye: elucidation of fluorescence emission mechanisms in solution and in the aggregate state
Shinichiro Kamino, Atsuya Muranaka, Miho Murakami, Asana Tatsumi, Noriyuki Nagaoka, Yoshinao Shirasaki, Keiko Watanabe, Kengo Yoshida, Jun Horigome, Seiji Komeda, Masanobu Uchiyama and Shuichi Enomoto
Phys. Chem. Chem. Phys., 2013, 15, 2131-2140
DOI: 10.1039/C2CP43503A

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Professor Mike Ashfold picks out his Editor’s Choice on photochemistry and spectroscopy

Mike AshfoldPCCP Advisory Board members are occasionally invited to select a few personal ‘highlights’ from recent issues of the journal. I received such a call in autumn 2012, and readily agreed to try and pick out ten particularly noteworthy papers in the general areas of photochemistry and spectroscopy.hydrogen bonding in electronically excited states

I had long penciled in the Christmas break as the first realistic opportunity for this task. I have been involved with PCCP in one way or another since its launch in 1999, so I should know better than most just how successful a journal it has now become. But it very soon became apparent that I would need to constrain my selection more tightly than I had originally imagined. PCCP publishes a lot of papers (1843 in 2012, many of which impinge on areas of photochemistry and spectroscopy, and many of which certainly merit very careful study. So, my first self-imposed (and completely arbitrary) constraint was that only papers carrying a (print) publication date of 2012 would be eligible for inclusion in my ‘Editor’s Choice’ list. This still left the challenge of somehow picking out less than one in every hundred papers!

The next obvious challenge was that Vol. 14 contains several themed issues, two of which – on Ultrafast chemical dynamics and on Hydrogen bonding in electronically excited states – could easily provide more than ten personal highlights.  In both cases, the guest editors did an exemplary job securing many new, high quality articles. I thoroughly recommend both of these themed issues to all who share my scientific interests, and claim writer’s prerogative by counting each as just one of my ten! I applied one more filter, and excluded from consideration the several excellent papers published in PCCP by Bristol colleagues during 2012.

The 2012 collection includes many notable articles offering new insights into photo-induced processes (e.g. photofragmentations, studies of intramolecular energy flow, photoionization, etc) and into the dynamics of bimolecular encounters – some with unprecedented definition of the initial (reactant) and final (product) quantum states. From the many excellent gas phase studies, I eventually selected:

M.P. Grubb, M.L. Warter and S.W. North, ‘Stereodynamics of multistate roaming’, which reported clear correlations between the velocity vector v and the angular momentum vector j of the NO fragments from NO3 photolysis, implying that the final intra-molecular abstraction in this roaming ‘reaction’ is constrained to occur at planar geometries;

C. Logé and U. Boesl, ‘Laser mass spectrometry with circularly polarized light: two-photon circular dichroism’ demonstrating two-photon circular dichroism of isolated gas phase molecules (cyclopentadienone) by multiphoton ionization measurements;

and the perspective article C.D. Lin and Junliang Xu, ‘Imaging ultrafast dynamics of molecules with laser-induced electron diffraction’, as a new route to imaging the ultrafast dynamics of small molecules with sub-Å spatial and a few-fsec temporal resolution.

My personal interests are now evolving to include photo-induced processes in solution, with particular emphasis on studies that reveal dynamical information about such processes. Obviously, there already exists a very rich and extensive literature pertaining to this field – which I am working hard to absorb – but the 2012 issues of PCCP provide many further articles that I have now come to regard almost as essential reading.  The following five complete my ‘Editor’s Choice’ list:

B. Abel, U. Buck, A. L. Sobolewski and W. Domcke, ‘On the nature and signatures of the solvated electron in water’ – a perspective article that reviews recent measurements of the binding energy of hydrated electrons by liquid-jet photoelectron spectroscopy, and considers their implications for our understanding of electron solvation in aqueous environments;

R.R. Frontiera, C. Fang, J. Dasgupta and R.A. Mathies, ‘Probing structural evolution along multidimensional reaction coordinates with femtosecond stimulated Raman spectroscopy’. Another excellent perspective article, in which the authors demonstrate how the exquisite time and frequency resolution afforded by fsec stimulated Raman spectroscopy has allowed them to follow structural evolutions in an isomerization, and in selected electron and proton transfer reactions;

O. Braem, T.J. Penfold, A. Cannizzo and M. Chergui, ‘A femtosecond fluorescence study of vibrational relaxation and cooling dynamics of UV dyes’– that reports a fsec broad-band fluorescence up-conversion study that explores details of the (contrasting) vibrational relaxation dynamics of two UV chromophores;

K.M. Lange, A. Kothe and E.F. Aziz, ‘Chemistry in solution: recent techniques and applications using soft X-ray spectroscopy’.  Another perspective article, this one highlighting some of the new opportunities for studying the structure and dynamics of chemical and biochemical systems in solution offered by time-resolved soft X-ray absorption and emission spectroscopies;

F. Zamponi, J. Stingl, M. Woerner and T. Elsaesser, ‘Ultrafast soft-mode driven charge relocation in an ionic crystal’  – a short paper that illustrates some of the exciting structural and dynamical insights offered by the latest generation fsec X-ray laser pulses in powder diffraction measurements of an ionic solid (potassium dihydrogen phosphate in this case).

Read Professor Ashfold’s Editor’s choice selection for free for a limited period:

Stereodynamics of multistate roaming
Michael P. Grubb, Michelle L. Warter and Simon W. North
DOI: 10.1039/C2CP40235A

Laser mass spectrometry with circularly polarized light: two-photon circular dichroism
Christoph Logé and Ulrich Boesl
DOI: 10.1039/C2CP41405H

Imaging ultrafast dynamics of molecules with laser-induced electron diffraction
C. D. Lin and Junliang Xu
DOI: 10.1039/C2CP41606A

On the nature and signatures of the solvated electron in water
B. Abel, U. Buck, A. L. Sobolewski and W. Domcke
DOI: 10.1039/C1CP21803D

Probing structural evolution along multidimensional reaction coordinates with femtosecond stimulated Raman spectroscopy
Renee R. Frontiera, Chong Fang, Jyotishman Dasgupta and Richard A. Mathies
DOI: 10.1039/C1CP22767J

Chemistry in solution: recent techniques and applications using soft X-ray spectroscopy
Kathrin M. Lange, Alexander Kothe and Emad F. Aziz
DOI: 10.1039/C2CP24028A

A femtosecond fluorescence study of vibrational relaxation and cooling dynamics of UV dyes
Olivier Braem, Thomas J. Penfold, Andrea Cannizzo and Majed Chergui
DOI: 10.1039/C2CP23167K

Ultrafast soft-mode driven charge relocation in an ionic crystal
F. Zamponi, J. Stingl, M. Woerner and T. Elsaesser
DOI: 10.1039/C2CP24072F

And don’t forget to check out his themed issue highlights:

Ultrafast chemical dynamics 
Guest Editors: Klaas Wynne (University of Glasgow, UK) and Neil T. Hunt (University of Strathclyde, UK).

Hydrogen bonding in electronically excited states 
Guest Editors: Guang-Jiu Zhao and Ke-Li Han (Dalian Institute of Chemical Physics, China)

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Grabbing attention: Graphene oxide and its ability to remove radioactive waste

In a recent PCCP paper, scientists have shown that graphene oxide has a surprising ability to quickly remove radioactive material from contaminated water.

This exciting article, by James Tour, Stepan Kalmykov and co-workers, has been featured in Futurity, UPI.com and Business Standard.

They found that atom-thick flakes of graphene oxide can bind quickly to natural and human-made radionuclides and condense them into solids for easy removal from contaminated water. The flakes are soluble in liquids and easily produced in bulk. 

Although detection of radionuceotide contamination is relatively simple, their removal from aqueous media is significantly challenging and costly. It is hoped that the findings from this collaborative effort from researchers at Rice University and Lomonosov Moscow State could be put into use in the cleanup of contaminated sites like the Fukushima nuclear plants damaged by the 2011 earthquake and tsunami.

Read this HOT PCCP article today: 

Graphene oxide for effective radionuclide removal
Anna Yu. Romanchuk, Alexander S. Slesarev, Stepan N. Kalmykov, Dmitry V. Kosynkin and James M. Tour
DOI: 10.1039/C2CP44593J

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PCCP Board member reflects on the future of chemistry research in India

PCCP Advisory Board member Professor Elangannan Arunan has co-authored a report in Angewandte Chemie on the excellent potential of Indian chemistry and how it can be best realised.

The authors ideas include improving access to start-up grants for new faculty members and encouraging the funding of new, untested ideas.

Check out these excellent PCCP Perspectives (co-)authored by researchers working in India:

Design and development of quantum dots and other nanoparticles based cellular imaging probe

Nikhil R. Jana
DOI: 10.1039/C0CP00726A

Do N-heterocyclic aromatic rings prefer π-stacking?
Mridula Guin , G. Naresh Patwari , S. Karthikeyan and Kwang S. Kim
DOI: 10.1039/C0CP02015J

The hydrogen bond: a molecular beam microwave spectroscopist’s view with a universal appeal
Mausumi Goswami and E. Arunan
DOI: 10.1039/B907708A

You may also be interested to read Prof. Arunan’s “Editor’s Choice” selection of articles in PCCP on a theme of bonding, reaction kinetics and dynamics.

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Understanding the interaction of C60 with red blood cells to guide therapeutic use of nanomaterials

Carbon nanomaterials have been hailed as potential drug carriers and biosensors, so it is important to understand how they interact with human cells. Scientists in China have studied the interaction of C60 nanoparticles (NPs) with human red blood cells and found that they made the cell membrane become “softer and easier to break”. They were able to successful model this, and predict the effect of a given amount of NPs. The finding could be used to determine appropriate dosage levels of C60 NPs in medical applications for maximum therapeutic effect with the minimum toxicity.

Read more about this fascinating work in this HOT PCCP article:

Mechanical characteristics of human red blood cell membrane changing due to C60 nanoparticles infiltration
Yue Zheng
DOI: 10.1039/C2CP42850D

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PCCP themed issue: Superresolution imaging and fabrication with light

Superresolution imaging and fabrication with light
Guest Editors: Françisco M. Raymo (University of Miami, USA)

PCCP is delighted to announce the high-profile themed issue ‘Superresolution imaging and fabrication with light’. It is our pleasure to invite you to submit to this themed issue.

The themed issue will be published in PCCP in  2013 and will be promoted to the community throughout the year to maximise the visibility of the work published.

Deadline for Submissions: 8 April 2013

Diffraction prevents the focusing of light within volumes of subwavelength dimensions. As a result, this unavoidable physical phenomenon limits the resolution of imaging and lithographic techniques based on far-field optics. In order to overcome these stringent limitations, significant research efforts have been directed, over the past decade, to the identification of protocols to overcome diffraction.

Some of these methods rely on the photochemical and photophysical properties of engineered chromophores to circumvent diffraction. These clever operating principles have already succeeded in bringing the resolution of fluorescence imaging and photolithography down to the nanoscale. Indeed, they are starting to impact biomedical research and, presumably, will soon have similar implications in information technology.

Thus it is timely to publish a themed collection in PCCP on this emerging and extremely promising area of research. The themed collection will provide a general overview of the fundamental principles of these strategies as well as covering optical imaging and fabrication at the nanoscale.

It is essential that all submissions to PCCP should contain new physical insight and contributions to this themed collection will be assessed on this basis.

  • Manuscripts can be submitted in any reasonable format using our online submissions service
  • Submissions should be high quality manuscripts of original, unpublished research
  • Communications and full papers can be submitted for consideration, which will be subject to rigorous peer review
  • Please indicate upon submission that your manuscript is intended for this themed is intended for the themed issue

Please contact the PCCP Editorial Office to let us know you plan to contribute an article.

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Physical-chemistry at the cross-road of advanced oxide materials

PCCP themed issue: call for papers

Physical-chemistry at the cross-road of advanced oxide materials
Guest Editors: Flora Boccuzzi (University of Torino), Leonardo Marchese (University of Piemonte Orientale “A. Avogadro”) and Gianmario Martra (University of Torino)

PCCP is delighted to announce the high-profile themed issue on advanced oxide materials. It is our pleasure to invite you to submit to this themed issue.

The themed issue will be published in PCCP in  2013 and will be promoted to the community throughout the year to maximise the visibility of the work published.

Deadline for Submissions: 18 March 2013

Oxide-based materials have been largely studied for their catalytic, electronic or adsorbent properties. Since the early 1960’s, when studies of high surface area oxides and metal dispersed on oxides of interest for catalysis and sensing were mostly developed, their interest has been extended along the years to other technological applications such as energy production, biotechnology and nanomedicine. In general, the broad range of emerging applications has pushed the preparation of new functional oxide-based materials, with expected tailored smart properties.

This themed issue is intended to highlight the central role of experimental and theoretical physical-chemical investigations of bulk and surface structural and functional properties of these materials to target actual, knowledge-based breakthroughs.

Topics covered by this themed issue include experimental and/or theoretical studies of:

  • structure of surface sites of heterogeneous catalysts by in-situ/in-operando methods;
  • mechanisms of reactions of interest for sustainable chemical processes and catalyzed by oxide-based materials;
  • molecular or photophysical events occurring at the surface/interface of nanomaterials for energy production;
  • understanding physico-chemical phenomena of oxide-based materials for energy production, storage and emission;
  • physico-chemical characterization of functional-oriented materials for sensing;
  • physico-chemical studies of the interaction of oxide-based materials with biomolecules;
  • unconventional spectroscopic studies.

Contributions on oxide-based materials outside the above list of topics will be also accepted provided that they are within the scope of PCCP and contain sufficient new physical insight.

  • Manuscripts can be submitted in any reasonable format using our online submissions service
  • Submissions should be high quality manuscripts of original, unpublished research
  • Communications and full papers can be submitted for consideration, which will be subject to rigorous peer review
  • Please indicate upon submission that your manuscript is intended for this themed is intended for the themed issue

Please contact the PCCP Editorial Office to let us know you plan to contribute an article.

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Understanding bonding in new inorganic clusters

Ajournal cover image paper from the recent PCCP themed issue on Predicting new molecules by quantum chemical methods has been highlighted in UCLA today. The article by Anastassia Alexandrova and her coworkers was featured on the back cover of the issue and describes the authors work on using computational methods to discover new inorganic clusters and understand their bonding.

Read this interesting PCCP paper today:

Selected AB42−/− (A = C, Si, Ge; B = Al, Ga, In) ions: a battle between covalency and aromaticity, and prediction of square planar Si in SiIn42−/−

Anastassia N. Alexandrova Michael J. Nayhouse Mioy T. Huynh Jonathan L. Kuo Arek V. Melkonian Gerardo Chavez Nina M. Hernando Matthew D. Kowal and Chi-Ping Liu
Phys. Chem. Chem. Phys., 2012, 14, 14815-14821

DOI: 10.1039/C2CP41821E

Selected AB42−/− (A = C, Si, Ge; B = Al, Ga, In) ions: a battle between covalency and aromaticity, and prediction of square planar Si in SiIn42−/−
Anastassia N. Alexandrova, Michael J. Nayhouse, Mioy T. Huynh, Jonathan L. Kuo, Arek V. Melkonian, Gerardo Chavez, Nina M. Hernando, Matthew D. Kowal and Chi-Ping Liu
DOI: 10.1039/C2CP41821E

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Combined theoretical and experimental approach identifies ideal nerve gas capture agent

Scientists working in Australia, Poland and the USA have come up with a combined theoretical and experimental approach for screening candidate materials that could be used to capture nerve gas agents. They conclude that the ideal material contains slit-shaped pores of around 0.5 nm width.

Their PCCP paper was highlighted on the nanowerk website. Read the article today:

Screening of Carbonaceous Nanoporous Materials for Capture of Nerve Agents
Piotr Kowalczyk, Artur Piotr Terzyk, Piotr A. Gauden and Alexander V Neimark
DOI: 10.1039/C2CP43366D

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Dreaming of new and unusual molecules

Table of contents imageIn this fascinating PCCP Perspective Alexander Ivanov and Alexander Boldyrev describe progress in using theoretical methods to predict unusual new molecules that can potentially be made for real in the experimental lab.

They suggest that emerging methods for predicting exciting materials and clusters will allow the field to develop in new directions in the coming years.

Read this PCCP Perspective article in full today:

Reliable predictions of unusual molecules
Alexander S. Ivanov and Alexander I. Boldyrev
DOI: 10.1039/C2CP42877F

If you enjoyed this article you may also be interested in our recent themed issue on Predicting new molecules by quantum chemical methods, Guest Edited by Gabriel Merino and Thomas Heine.

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