Author Archive

New themed collection on ‘Medicinal Chemistry Small Molecule Probes’

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We’re pleased to announce that a new themed collection from RSC Chemical Biology has now been published online!

Read the collection

This themed collection is Guest Edited by Prof. John Spencer (University of Sussex, UK), Dr Gemma Nixon (University of Liverpool, UK), and Prof. Miraz Rahman (King’s College London, UK). It features contributions which investigate general medicinal chemistry, chemical probes for imaging, proteomics, PROTACs, fragment-based drug discovery, covalent binders, chemical tools for protein profiling and activity modulation, and natural product inspired medicinal chemistry and chemical biology.

A small selection of the articles has been provided below – please visit the link above for the full collection. All articles in RSC Chemical Biology are open access and free to read.

Editorial

Introduction to ‘Medicinal Chemistry Small Molecule Probes’
Gemma Nixon, Miraz Rahman and John Spencer
RSC. Chem. Biol., 2024, 5, DOI: 10.1039/D4CB90005G

Opinion

Chirality: a key parameter in chemical probes
Andrew McGown, Jordan Nafie, Mohammed Otayfah, Storm Hassell-Hart, Graham J. Tizzard, Simon J. Coles, Rebecca Banks, Graham P. Marsh, Hannah J. Maple, George E. Kostakis, Ilaria Proietti Silvestri, Paul Colbon and John Spencer
RSC. Chem. Biol., 2023, 4, 716–721, DOI: 10.1039/D3CB00082F

Reviews

PROTAC chemical probes for histone deacetylase enzymes
Urvashi Patel, Joshua P. Smalley and James T. Hodgkinson
RSC. Chem. Biol., 2023, 4, 623–634, DOI: 10.1039/D3CB00105A

Antitumour imidazotetrazines: past, present… and future?
Malcolm F. G. Stevens and Richard T. Wheelhouse
RSC. Chem. Biol., 2023, 4, 736–741, DOI: 10.1039/D3CB00076A

Papers and Communications

Virtual screening, identification and in vitro validation of small molecule GDP-mannose dehydrogenase inhibitors
Jonathan P. Dolan, Sanaz Ahmadipour, Alice J. C. Wahart, Aisling Ní Cheallaigh, Suat Sari, Chatchakorn Eurtivong, Marcelo A. Lima, Mark A. Skidmore, Konstantin P. Volcho, Jóhannes Reynisson, Robert A. Field and Gavin J. Miller
RSC. Chem. Biol., 2023, 4, 865–870, DOI: 10.1039/D3CB00126A

A cell-permeable probe for the labelling of a bacterial glycosyltransferase and virulence factor
Yong Xu and Gerd K. Wagner
RSC. Chem. Biol., 2024, 5, 55–62, DOI: 10.1039/D3CB00092C

We hope you enjoy this new themed collection from RSC Chemical Biology.

New themed collection on ‘Molecular and nanotheranostics’

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We’re pleased to announce that a new themed collection from RSC Chemical Biology and RSC Medicinal Chemistry has now been published online.

Read the collection

This themed collection, Guest Edited by Professor Thimmaiah Govindaraju (Jawaharlal Nehru Centre for Advanced Scientific Research, India), covers advancements in molecular and nanotheranostics with particular emphasis on the design of theranostic tools and their selective interaction with biomolecular targets to image and ameliorate pathological conditions. The collection is anticipated to catalyze the development of precision theranostics as advanced and personalizable tools in chemical biology and modern medicine.

The articles in the collection are listed below. Articles in RSC Chemical Biology are open access and free to read.

Editorial

Introduction to the themed collection on ‘Molecular and nanotheranostics’
Thimmaiah Govindaraju
RSC. Chem. Biol., 2024, 5, DOI: 10.1039/D3CB90050A

Reviews

Small molecules and conjugates as theranostic agents
Sumon Pratihar, Krithi K. Bhagavath and Thimmaiah Govindaraju
RSC. Chem. Biol., 2023, 4, 826–849, DOI: 10.1039/D3CB00073G

Recent progress of small-molecule-based theranostic agents in Alzheimer’s disease
Furong Gao, Jiefang Chen, Yuancun Zhou, Letong Cheng, Ming Hu and Xiaohui Wang
RSC. Med. Chem., 2023, 14, 2231–2245, DOI: 10.1039/D3MD00330B

Papers and Communications

Single-chain multicolor-reporter templates for subcellular localization of molecular events in mammalian cells
Sung-Bae Kim, Ramasamy Paulmurugan, Nobuo Kitada and Sojiro A. Maki
RSC. Chem. Biol., 2023, 4, 1043–1049, DOI: 10.1039/D3CB00077J

Fluorescent naphthalimide boronates as theranostics: structural investigations, confocal fluorescence and multiphoton fluorescence lifetime imaging microscopy in living cells
Megan J. Green, Haobo Ge, Stephen E. Flower, Charareh Pourzand, Stanley W. Botchway, Hui-Chen Wang, Navaratnarajah Kuganathan, Gabriele Kociok-Köhn, Meng Li, Suying Xu, Tony D. James and Sofia I. Pascu
RSC. Chem. Biol., 2023, 4, 1082–1095, DOI: 10.1039/D3CB00112A

Cationic Dextrin Nanoparticles for Effective Intracellular Delivery of Cytochrome C in Cancer Therapy
Ankita Sarkar, Sanchita Sarkhel, Deepali Bisht and Amit Jaiswal
RSC. Chem. Biol., 2024, 5, DOI: 10.1039/D3CB00090G

We hope you enjoy this new themed collection from RSC Chemical Biology and RSC Medicinal Chemistry.

Professor Christopher J. Chang recieves the ACS Alfred Bader Award

We’re pleased to share that Professor Christopher J. Chang, Advisory Board member for RSC Chemical Biology, is the recipient of the 2024 Alfred Bader Award in Bioinorganic or Bioorganic Chemistry. Congratulations Chris! You can read more about Chris’ award, and Professor Michelle Chang’s, in UC Berkeley’s announcement; and find out about all of the 2024 ACS National Award winners at their web page,

New themed collection on ‘Chemical Proteomics’

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We’re pleased to announce that a new themed collection from RSC Chemical Biology on Chemical Proteomics has now been published online.

Read the collection

This collection, Guest Edited by Dr Keriann Backus (UCLA, USA) and Dr Stephan Hacker (Leiden University, Netherlands), highlights work on applications of chemoproteomics to study the targets and off-targets of covalent and non-covalent inhibitors, to study the reactivity of amino acids in the proteome, to develop new reactive groups for photocrosslinkers, covalent inhibitors and protein labeling as well as to study post-translational modifications and cofactor binding proteome-wide.

A listing of the articles has been provided below. All articles in RSC Chemical Biology are open access and free to read.

Perspective

Finding a vocation for validation: taking proteomics beyond association and location
Marcus J. C. Long, Jinmin Liu and Yimon Aye
RSC. Chem. Biol., 2023, 3, 110–120, DOI: 10.1039/D2CB00214K

Communications

Quantitative profiling of PTM stoichiometry by resolvable mass tags
Ying Chen, Baiyi Quan, Yuanpei Li, Yuan Liu, Wei Qin and Chu Wang
RSC. Chem. Biol., 2023, 3, 1320–1324, DOI: 10.1039/D2CB00179A

Chemoproteomic mapping of human milk oligosaccharide (HMO) interactions in cells
Abdullah A. Hassan, Jacob M. Wozniak, Zak Vilen, Weichao Li, Appaso Jadhav, Christopher G. Parker and Mia L. Huang
RSC. Chem. Biol., 2023, 3, 1369–1374, DOI: 10.1039/D2CB00176D

Papers

The covalent reactivity of functionalized 5-hydroxy-butyrolactams is the basis for targeting of fatty acid binding protein 5 (FABP5) by the neurotrophic agent MT-21
Esben B. Svenningsen, Rasmus N. Ottosen, Katrine H. Jørgensen, Marija Nisavic, Camilla K. Larsen, Bente K. Hansen, Yong Wang, Kresten Lindorff-Larsen, Thomas Tørring, Stephan M. Hacker, Johan Palmfeldt and Thomas B. Poulsen
RSC. Chem. Biol., 2023, 3, 1216–1229, DOI: 10.1039/D2CB00161F

A peptide-crosslinking approach identifies HSPA8 and PFKL as selective interactors of an actin-derived peptide containing reduced and oxidized methionine
Aaron Maurais and Eranthie Weerapana
RSC. Chem. Biol., 2023, 3, 1282–1289, DOI: 10.1039/D2CB00183G

Chemical proteomic analysis of bile acid-protein targets in Enterococcus faecium
Xinglin Yang, Xiaohui Zhao, Victor Chen and Howard C. Hang
RSC. Chem. Biol., 2023, 3, 1397–1402, DOI: 10.1039/D2CB00178K

Photoreactive bioorthogonal lipid probes and their applications in mammalian biology
Karthik Shanbhag, Kavita Sharma and Siddhesh S. Kamat
RSC. Chem. Biol., 2023, 3, 37–46, DOI: 10.1039/D2CB00174H

Predicting small molecule binding pockets on diacylglycerol kinases using chemoproteomics and AlphaFold
Roberto Mendez, Minhaj Shaikh, Michael C. Lemke, Kun Yuan, Adam H. Libby, Dina L. Bai, Mark M. Ross, Thurl E. Harris and Ku-Lung Hsu
RSC. Chem. Biol., 2023, 3, 422–430, DOI: 10.1039/D3CB00057E

We hope you enjoy this new themed collection from RSC Chemical Biology.

A mechanistic study on the cellular uptake, intracellular trafficking, and antisense gene regulation of bottlebrush polymer-conjugated oligonucleotides

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Read the full article here.

RSC Chemical Biology is now indexed in the Directory of Open Access Journals (DOAJ), PubMed Central, Scopus and Web of Science: Emerging Sources Citation Index.  Find out more about the journal and submit your work at rsc.li/rsc-chembio

RSC Chemical Biology

Royal Society of Chemistry

www.rsc.org

Call for papers – Medicinal Chemistry Small Molecule Probes

A banner with photographs of the Guest Editors and a summary of the information in this post

RSC Chemical Biology is delighted to welcome papers for its latest online themed collection on ‘Medicinal Chemistry Small Molecule Probes’, guest edited by John Spencer (University of Sussex, UK), Gemma Nixon (University of Liverpool, UK), and Miraz Rahman (King’s College London, UK).

Contributions are welcome which investigate general medicinal chemistry, chemical probes for imaging, proteomics, protacs, fragment-based drug discovery, covalent binders, chemical tools for protein profiling and activity modulation, and natural product inspired medicinal chemistry and chemical biology.

The deadline for submissions is 1 June 2023. Submit your work to the collection now!

Promotion of the collection is scheduled for late 2023, with articles published online as soon as they’re accepted.

Authors are welcome to submit original research in the form of a Communication or Full Paper. Articles can be submitted via our website: rsc.li/rsc-chembio. When submitting your manuscript, please mention that it is intended for this themed collection in the “notes to the editor” box. The Editorial Office reserves the right to check suitability of submissions for both the journal and the scope of the collection, and inclusion of accepted articles in the final themed collection is not guaranteed.

Explore all open calls for papers from RSC journals!

About RSC Chemical Biology:

Led by Hiroaki Suga (University of Tokyo), RSC Chemical Biology is dedicated to publishing and disseminating the most exceptionally significant, breakthrough findings of interest to the chemical biology community. All submissions are handled by our experienced and internationally recognised Associate Editors. For more information on the journal, please visit the journal homepage.

As a gold open access journal, there are no barriers to accessing content and your research article will reach an international audience. Articles accepted for publication in this themed collection will have their article processing charges waived.

RSC Chemical Biology is now indexed in the Directory of Open Access Journals (DOAJ), PubMed Central, Scopus and Web of Science: Emerging Sources Citation Index. Find out more about the journal and submit your work at rsc.li/rsc-chembio.

New themed collection on ‘Development of bio-orthogonal tools’

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We’re pleased to announce that a new themed collection from RSC Chemical Biology has now been published online.

Read the collection

Guest-edited by Chengqi Yi (Peking University, China) and Yan Zhang (Nanjing University, China), this collection highlights work on bio-orthogonal chemistry, reactions and probes in labeling, manipulating, imaging and sequencing of protein, DNA, RNA and bioactive metabolites.

The article line-up is provided below. All articles in RSC Chemical Biology are open access and free to read.

Editorial

Introduction to ‘Development of bio-orthogonal tools’
Yan Zhang and Chengqi Yi
RSC. Chem. Biol., 2022, Advance Article, DOI: 10.1039/D2CB90045A

Reviews

Labeling and sequencing nucleic acid modifications using bio-orthogonal tools
Hui Liu, Yafen Wang and Xiang Zhou
RSC. Chem. Biol., 2022, 3, 994–1007, DOI: 10.1039/D2CB00087C

Imitate to illuminate: labeling of bacterial peptidoglycan with fluorescent and bio-orthogonal stem peptide-mimicking probes
Huibin Lin, Chaoyong Yang and Wei Wang
RSC. Chem. Biol., 2022, 3, 1198–1208, DOI: 10.1039/D2CB00086E

Papers

A library of Rhodamine6G-based pH-sensitive fluorescent probes with versatile in vivo and in vitro applications
Benton Swanson, Margaret Durdan, Miranda Eberle, Seth Woodbury, Ava Mauser, Jason Gregory, Boya Zhang, David Niemann, Jacob Herremans, Peter X. Ma, Joerg Lahann, Megan Weivoda, Yuji Mishina and Colin F. Greineder
RSC. Chem. Biol., 2022, 3, 748–764, DOI: 10.1039/D2CB00030J

Methyltetrazine as a small live-cell compatible bioorthogonal handle for imaging enzyme activities in situ
Diana Torres-García, Merel A. T. van de Plassche, Emma van Boven, Tyrza van Leeuwen, Mirjam G. J. Groenewold, Alexi J. C. Sarris, Luuk Klein, Herman S. Overkleeft and Sander I. van Kasteren
RSC. Chem. Biol., 2022, 3, 1325–1330, DOI: 10.1039/D2CB00120A

We hope you enjoy this new themed collection from RSC Chemical Biology.

Call for papers – Molecular and nanotheranostics

 

A slide summarising the information in this blog post.

RSC Chemical Biology and RSC Medicinal Chemistry are delighted to welcome papers for an online themed collection on ‘Molecular and nanotheranostics’, guest edited by Prof. Thimmaiah Govindaraju (Jawaharlal Nehru Centre for Advanced Scientific Research, India).

 Over a decade of intense research has positioned theranostics as a promising and integrated approach to advance biomedical research and medicine. The term theranostics essentially conveys the idea of combining therapeutic and diagnostic modalities to provide a holistic solution for disease management. Theranostics is also referred to as diagnostic therapy, wherein molecular and/or material tools for non-invasive treatment and diagnostic imaging are strategically embedded into a single system. For instance, multifunctional diagnostic platforms carrying therapeutic and target tracking agents offer remedial effects and imaging of markers in tissue or organs, which is used to assess disease staging, treatment planning and therapeutic efficacy.

Theranostics has the potential to revolutionize the practice and adaptation of personalized medicine to tackle chronic disease conditions like cancer and neuronal disorders. Generally, radiopharmaceutical, nano and macromolecular systems armed with tools to detect, treat, track, and image biomolecular targets in real-time have been employed as theranostics to effectively manage disease progression and cure.

In recent years, the field has witnessed the emergence of small molecules or small molecular conjugates as theranostic tools. This special collection in RSC Chemical Biology and RSC Medicinal Chemistry intends to cover and highlight advancements in molecular theranostics with particular emphasis on chemical biology of molecular design of theranostic tools and their selective interaction with the biomolecular targets to image and ameliorate the pathological conditions. This themed collection is anticipated to catalyze the development of precision theranostics as advanced and personalizable tools in chemical biology and modern medicine.

 The deadline for submissions has been extended to 30 June 2023.

 Articles can be submitted via  the appropriate journal’s website, where you can find details on their scopes and focus. RSC Chemical Biology accepts exceptionally significant and breakthrough findings of interest to the chemical biology community, while RSC Medicinal Chemistry publishes significant research in medicinal chemistry and related drug discovery science.

RSC Chemical Biology: rsc.li/rsc-chembio
RSC Medicinal Chemistry: rsc.li/rsc-medchem

Authors are welcome to submit original research in the form of a Communication or Full Paper. Note that RSC Chemical Biology is a gold open access, journal, however submissions for this collection will have their article processing charges (APCs) waived.

When submitting your manuscript, please mention that it is intended for this themed collection in the “notes to the editor” box. The Editorial Office reserves the right to check suitability of submissions for both the journal and the scope of the collection, and inclusion of accepted articles in the final themed collection is not guaranteed. Promotion of the collection is scheduled for late-2023, with articles published online as soon as they’re accepted.

Explore all open calls for papers from RSC journals!

Call for papers – Chemical Biology of Metals

A banner listing the details for the collection, including a dealdine of 6 March 2023, and a submission link rsc.li/rsc-chembio

RSC Chemical Biology is delighted to welcome papers for its latest online themed collection on ‘Chemical Biology of Metals’, guest edited by Christopher J. Chang (University of California, Berkeley, USA); Angela Casini (Technical University of Munich, Germany); Hongzhe Sun (University of Hong Kong, China); and Hui Chao (Sun Yat-Sen University, China).

 Contributions are welcome which investigate the fundamental inorganic chemistry of life and/or use inorganic chemistry for medicine. New chemical methods for sensing and imaging, metalloproteomics, metal-based therapeutics and diagnostics, as well as structural and functional consequences of novel protein and nucleic acid metallobiochemistry in vitro and in living systems, are welcome for this themed collection on emerging topics in chemical biology of metals research.

 The deadline for submissions is 6 March 2023. Submit your work to the collection now!

Promotion of the collection is scheduled for mid-2023, with articles published online as soon as they’re accepted.

Authors are welcome to submit original research in the form of a Communication or Full Paper.  Articles can be submitted via our website: rsc.li/rsc-chembio. When submitting your manuscript, please mention that it is intended for this themed collection in the “notes to the editor” box. The Editorial Office reserves the right to check suitability of submissions for both the journal and the scope of the collection, and inclusion of accepted articles in the final themed collection is not guaranteed.

Explore all open calls for papers from RSC journals!

About RSC Chemical Biology:

Led by Hiroaki Suga (University of Tokyo), RSC Chemical Biology is dedicated to publishing and disseminating the most exceptionally significant, breakthrough findings of interest to the chemical biology community. All submissions are handled by our experienced and internationally recognised Associate Editors. For more information on the journal, please visit the journal homepage.

As a gold open access journal, there are no barriers to accessing content and your research article will reach an international audience. Articles accepted for publication in this themed collection will have their article processing charges waived.

RSC Chemical Biology is now indexed in the Directory of Open Access Journals (DOAJ), PubMed Central, Scopus and Web of Science: Emerging Sources Citation Index. Find out more about the journal and submit your work at rsc.li/rsc-chembio.

The first RSC Chemical Biology Emerging Investigators collection

Photographs of the six corresponding authors on the articles in this collection

We’re pleased to announce that our first Emerging Investigators collection has now been published online!

Read the collection

RSC Chemical Biology is committed to supporting and recognizing the excellent work of early career researchers. We are thus proud to present our first annual Emerging Investigators collection. The collection showcases research carried out by internationally recognised, up-and-coming scientists in the early stage of their independent careers who are making outstanding contributions to their respective fields. Each contributor was recommended by an expert in their field for carrying out work with the potential to influence future directions. The collection encompasses the entire scope of the journal.

Looking forward, we will soon be inviting for an Emerging Investigators Collection that will be published in 2023, and you are encouraged to recommend a colleague at the beginning of their career by contacting the Editorial Office. To be considered, a scientist must be a research group leader with less than 10 years of independent research (although the timescale is flexible in cases of career breaks and personal circumstances).

Congratulations to all the featured researchers on their work. Join us in celebrating their contributions!

Editorial

RSC Chemical Biology Emerging Investigators Collection and Outstanding Paper Award 
RSC. Chem. Biol., 2022, Advance Article, DOI: 10.1039/D2CB90027K

Profile

Contributors to the RSC Chemical Biology Emerging Investigators Collection 2022 
RSC. Chem. Biol., 2022, Advance Article, DOI: 10.1039/D2CB90028A

Communications

The CSY-protecting group in the microwave-assisted synthesis of aggregation-prone peptides 
Truc Lam Pham, Jennifer Zilke, Christine Charlotte Müller and Franziska Thomas
RSC. Chem. Biol., 2022, 3, 426–430, DOI: 10.1039/D1CB00252J

A light-initiated chemical reporter strategy for spatiotemporal labeling of biomolecules 
Feifei Wang, Hao Kong, Xiangfeng Meng, Xiao Tian, Changjiang Wang, Lei Xu, Xiang Zhang, Lei Wang and Ran Xie
RSC. Chem. Biol., 2022, 3, 539–545, DOI: 10.1039/D2CB00072E

A dual-responsive doxorubicin–indoximod conjugate for programmed chemoimmunotherapy 
Zhaoxuan Yang, Jiaqi Huang, Yaying Lin, Xiangjie Luo, Haojin Lin, Hongyu Lin and Jinhao Gao
RSC. Chem. Biol., 2022, 3, 853–858, DOI: 10.1039/D1CB00257K

Fluorescent metabolic labeling-based quick antibiotic susceptibility test for anaerobic bacteria
Juan Gao, Juanxiu Qin, Chenling Ding, Yuan Gao, Junnan Guo, Min Li, Chaoyong Yang and Wei Wang
RSC Chem. Biol., 2022, Advance Article, DOI: 10.1039/D2CB00163B

Papers

Proteomic characterization of phagocytic primary human monocyte-derived macrophages
Regan F. Volk, José L. Montaño, Sara E. Warrington, Katherine L. Hofmann and Balyn W. Zaro
RSC. Chem. Biol., 2022, 3, 783–793, DOI: 10.1039/D2CB00076H

Improved ClickTags enable live-cell barcoding for highly multiplexed single cell sequencing
Xinlu Zhao, Shiming Sun, Wenhao Yu, Wenqi Zhu, Zihan Zhao, Yiqi Zhou, Xiuheng Ding, Nan Fang, Rong Yang and Jie P. Li
RSC. Chem. Biol., 2022, Advance Article, DOI: 10.1039/D2CB00046F

Structural insights into inhibition of the drug target dihydroorotate dehydrogenase by bacterial hydroxyalkylquinolines 
Samantha M. Horwitz, Tamra C. Blue, Joseph A. Ambarian, Shotaro Hoshino, Mohammad R. Seyedsayamdost and Katherine M. Davis
RSC. Chem. Biol., 2022, 3, 420–425, DOI: 10.1039/D1CB00255D

One-step asparaginyl endopeptidase (OaAEP1)-based protein immobilization for single-molecule force spectroscopy
Xuan Ding, Ziyi Wang, Bin Zheng, Shengchao Shi, Yibing Deng, Hanyang Yu and Peng Zheng
RSC Chem. Biol., 2022, Advance Article, DOI: 10.1039/D2CB00135G