Top ten most accessed articles in July 2012

This month sees the following articles in MedChemComm that are in the top ten most accessed:

The developability of heteroaromatic and heteroaliphatic rings – do some have a better pedigree as potential drug molecules than others?
Timothy J. Ritchie, Simon J. F. Macdonald, Simon Peace, Stephen D. Pickett and Christopher N. Luscombe
Med. Chem. Commun., 2012, 3, 1062-1069
DOI: 10.1039/C2MD20111A

The use of phosphate bioisosteres in medicinal chemistry and chemical biology
Thomas S. Elliott, Aine Slowey, Yulin Ye and Stuart J. Conway
Med. Chem. Commun., 2012, 3, 735-751
DOI: 10.1039/C2MD20079A

Gd(III) chelates for MRI contrast agents: from high relaxivity to “smart”, from blood pool to blood–brain barrier permeable
Chang-Tong Yang and Kai-Hsiang Chuang
Med. Chem. Commun., 2012, 3, 552-565
DOI: 10.1039/C2MD00279E

Property based optimisation of glucokinase activators – discovery of the phase IIb clinical candidate AZD1656
Michael J. Waring, David S. Clarke, Mark D. Fenwick, Linda Godfrey, Sam D. Groombridge, Craig Johnstone, Darren McKerrecher, Kurt G. Pike, John W. Rayner, Graeme R. Robb and Ingrid Wilson
Med. Chem. Commun., 2012, 3, 1077-1081
DOI: 10.1039/C2MD20077E

A matched molecular pair analysis of in vitro human microsomal metabolic stability measurements for heterocyclic replacements of di-substituted benzene containing compounds – identification of those isosteres more likely to have beneficial effects
Alexander G. Dossetter, Adam Douglas and Charles O’Donnell
Med. Chem. Commun., 2012, 3, 1164-1169
DOI: 10.1039/C2MD20155K

Small molecules targeting phosphoinositide 3-kinases
Peng Wu and Yongzhou Hu
Med. Chem. Commun., 2012, Advance Article
DOI: 10.1039/C2MD20044A

Minisci reactions: Versatile CH-functionalizations for medicinal chemists
Matthew A. J. Duncton
Med. Chem. Commun., 2011, 2, 1135-1161
DOI: 10.1039/C1MD00134E

On the importance of synthetic organic chemistry in drug discovery: reflections on the discovery of antidiabetic agent ertugliflozin
Vincent Mascitti, Benjamin A. Thuma, Aaron C. Smith, Ralph P. Robinson, Thomas Brandt, Amit S. Kalgutkar, Tristan S. Maurer, Brian Samas and Raman Sharma
Med. Chem. Commun., 2012, Advance Article
DOI: 10.1039/C2MD20163A

Optimisation of aqueous solubility in a series of G protein coupled receptor 119 (GPR119) agonists
James S. Scott, Alan M. Birch, Katy J. Brocklehurst, Hayley S. Brown, Kristin Goldberg, Sam D. Groombridge, Julian A. Hudson, Andrew G. Leach, Philip A. MacFaul, Darren McKerrecher, Ruth Poultney, Paul Schofield and Per H. Svensson
Med. Chem. Commun., 2012, Advance Article
DOI: 10.1039/C2MD20130E

Editorial: natural products themed issue
Sylvie Garneau-Tsodikova and Christopher T. Walsh
Med. Chem. Commun., 2012, 3, 852-853
DOI: 10.1039/C2MD90031A

Why not take a look at the articles today and blog your thoughts and comments below.

Fancy submitting an article to MedChemComm? Then why not submit to us today or alternatively email us your suggestions.

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An anion structure–activity relationship of imidazolium-based synthetic transporters

This article is HOT as recommended by the referees, and is free to access for 4 weeks.

The study of the mechanisms of transport of anions in general, and particularly those relating to Cl, has slowly been gaining significance, with a number of synthetic peptides with selective anionophoric properties on chloride being recently recently reported.

In a previous Communication Andreea R. Schmitzer and colleagues at University of Montréal demonstrated that imidazolium salts with low molecular weights have anionophoric properties, and that it was also possible to modulate the Cl transport across a bilayer by complexing the imidazolium salt with cyclodextrins and cucurbituril, i.e. the anionic diffusion through the membrane could be activated or inhibited.

In this MedChemComm article Schmitzer et al. report the factors intrinsic to the imidazolium salts that are responsible for the salts’ ionophoric activity by:

1)    Using the lucigenin method to demonstrate the influence of the nature of the imidazolium counter-anion on its anionophoric activity across the membrane of egg yolk phosphatidylcholine (EYPC) liposomes.
2)    Describing the efflux of different anions using the pH-sensitive HPTS (8-hydroxypyrene-1,3,6-trisulfonic acid trisodium salt) method.
3)    Presenting the kinetic parameters of the most active imidazolium salt, the EC50 and the rate constant characterising the efflux of the Cl

Read the complete study by following the link below….

An anion structure–activity relationship of imidazolium-based synthetic transporters

Claude-Rosny Elie, Mathieu Charbonneau and Andreea R. Schmitzer
DOI: 10.1039/C2MD20107K

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Review: Amino-derivatives of the sesquiterpene lactone class of natural products as prodrugs

The sesquiterpene lactone class of natural products displays a diverse array of biological activities due to the presence of the α-methylene-γ-lactone motif.  One of the limitations of is the intrinsic reactivity of the α-methylene-γ-lactone- motif which represents an electrophilic Michael acceptor that reacts with thiol nucleophiles and leads to undesired and toxic side effects

This review by David A. Colby et al. provides an interesting overview about an emerging prodrug approach that has been developed to overcome these problems in which an amine is added into the α-methylene-γ-lactone to mask this group from nucleophiles and increase solubility.

Included is a concise description of the medicinal chemistry of amino-derivatives of the sesquiterpene lactones, from early development in synthesis, to application in medicinal chemistry, to its move to a clinical candidate.

For the complete picture on this prodrug approach download the review now by following the link below…

Amino-derivatives of the sesquiterpene lactone class of natural products as prodrugs
James R. Woods, Huaping Mo, Andrew A. Bieberich, Tanja Alavanja and David A. Colby
DOI: 10.1039/C2MD20172K

The review features as part of MedChemComm’s New Talent issue; view the expanding collection of articles for this issue HERE
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Upcoming event: The Discovery of Abiraterone

Chemistry for Tomorrow’s World 2012 – UK Discovery Excellence

6 pm, 20th September 2012
Chemistry Centre, Burlington House, London

The nature of drug discovery is changing, but the UK remains a world leader in the development of new medicines. The discovery of Abiraterone is one recent success, developed at The Institute of Cancer Research (ICR) and The Royal Marsden Hospital (RMH). In 2011, it completed its journey from an idea to a life-extending treatment for men with advanced prostate cancer.

Keynote speaker: Professor Johann de Bono, Institute of Cancer Research  

Professor de Bono led on the drug’s development, taking it from Phase I first-in-man trials to the successful completion of Phase III trials. During his lecture he will highlight the Institute of Cancer Research’s unique partnership with the Royal Marsden hospital, with an emphasis on the bench-to-bedside approach that has already made a real impact on cancer patients’ lives. Professor de Bono’s talk will be followed by a chaired panel discussion which will address the question:

How can discovery programmes such as the successful work that led to the discovery of Abiraterone be repeated within the UK academic environment?

The evening will finish with a wine reception. This event is free to attend, but delegates must pre-register to guarantee admittance. Further details and online registration can be found at www.rsc.org/discovery-of-abiraterone

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Recent applications of multicomponent reactions in medicinal chemistry

Multicomponent reactions (MCRs) are defined as being a one-pot process that involves the reaction of at least three components to form a single product that retains the majority of the atoms from the starting materials.

These reactions are atom economic, step efficient, and owing to their flexibility, have found applications in many fields of medicinal chemistry, such as cancer therapy and infectious diseases, where MCRs are powerful tools for drug discovery and development. The application in these fields is quite broad, ranging from initial lead structure identification to the generation of large libraries of analogues.

In this Review Romano V. A. Orru and colleagues from VU University Amsterdam highlight recent applications (2005-present) of multicomponent reactions in medicinal chemistry, discussing these applications by therapeutic field.

Read the full review…. Here

Recent applications of multicomponent reactions in medicinal chemistry
Paul Slobbe, Eelco Ruijter and Romano V. A. Orru

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Phosphofructokinase: structural and functional aspects and design of selective inhibitors

Human African trypanosomiasis, also commonly known as sleeping sickness, is a disease that leads to many deaths worldwide and is caused by protozoan parasites. When in the bloodstream these parasites can only produce the ATP (adenosine triphosphate) they need to survive via a glycolytic pathway, making this pathway essential for the parasite’s survival.

Phosphofructokinase is a kinase enzyme that phosphorylates fructose 6-phosphate in the glycolysis metabolic pathway, and is of central importance to carbohydrate metabolism. As such it is a very promising target for anti-trypanosomal drug design to treat sleeping sickness.

In this review Renata B. Oliveira et al. present a survey of recent literature regarding the structural and functional properties of phosphofructokinase as well as discussing its importance as a target in the development of selective therapeutics to treat Human African trypanosomiasis.

Read the full review here…

Phosphofructokinase: structural and functional aspects and design of selective inhibitors
Stefânia N. Lavorato, Saulo F. Andrade, Thaïs H. A. Silva, Ricardo J. Alves and Renata B. Oliveira
DOI: 10.1039/C2MD20122D

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Trojan horse tuberculosis treatment

During the Trojan war, Greeks built a huge wooden horse, hid men inside it and left it outside the city of Troy. The Trojans, claiming it as a victory trophy, brought it into their city. That night, the Greek force crept out of the horse, opened the gates for the rest of the Greek army and they destroyed the city of Troy

Marvin Miller at the University of Notre Dame and colleagues have synthesised analogues of iron scavenging compounds that contain a maleimide functional group for future drug conjugation. Miller explains that these compounds will be actively assimilated by the M. tuberculosis pathogen by the active iron transport system, but can also carry a lethal agent into the pathogen.

One of the challenges of synthesising drug conjugates is finding a suitable functional group to attach the drug to the conjugate. The maleimide functionalised mycobactin analogue synthesised by the team simplifies the synthetic route by reducing the need for protecting groups. Thiol-maleimide chemistry can then be used to attach the drug.

Derek Tan, an expert in rational drug design at the Memorial Sloan–Kettering Cancer Center, US, is enthusiastic about the work. He believes that the advantage of the maleimide functional group is that it can react with nucleophiles, which may already be present in a potential conjugate drug, as opposed to electrophiles, which generally need to be synthetically introduced into the conjugate drug. This maleimide–mycobactin analogue ‘will enable the future synthesis of a wider array of potential Trojan horse antibiotics’, says Tan.

Miller and co-workers found that the maleimide–mycobactin analogue displayed antibiotic activity against Mycobacterium tuberculosis, but it was inactive against a broad panel of Gram-positive and Gram-negative bacteria. ‘The use of siderophores [iron chelating compounds] to deliver antibiotics exclusively into a single type of bacteria (e.g., Mtb, P. aeruginosa, E. coli), could reduce the administration of broad-spectrum antibiotics, minimising exposure and therefore the development of drug resistance’ says Miller.

In the future, the team intends to use a rational approach for selecting drugs to attach to the maleimide–mycobactin analogue, starting with drugs that inhibit essential survival processes.

References
1. R E Juárez-Hernández, S G Franzblau and M J Miller, Org. Biomol. Chem., 2012, DOI: 10.1039/c2ob26077h

2. Chemistry World story by Alisa Becker

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MedChemComm issue 9 now available

Issue 9 of MedChemComm has arrived….read it today!

Front cover:

Oral delivery of drugs aims to open up new areas of peptide/protein therapeutics associated with the removal for a need for injections. The major problems facing oral delivery of peptides/proteins is hydrolysis/proteolysis in the gastrointestinal tract and an inefficient uptake mechanism for peptides/proteins from the tract. Robert P. Doyle et al. are interested in the use of the vitamin B12 dietary uptake pathway to address these hurdles. In this paper Doyle et al. report the synthesis, purification and characterisation of a new B12-insulin conjugate attached between the B12 ribose hydroxyl group and insulin PheB1

Examining the effects of vitamin B12 conjugation on the biological activity of insulin: a molecular dynamic and in vivo oral uptake investigation
Susan Clardy-James, Damian G. Allis, Timothy J. Fairchild and Robert P. Doyle

Inside cover:

Doxorubicin (DOX) is a widely adopted chemotherapy treatment for many different varieties of cancer, but its clinical value is limited due to its systemic toxicity. Currently one of the best ways to minimize the dose-related toxic shortcoming of DOX is to encapsulate the drug in various drug-delivery systems. In this paper from Shiqi Peng and co-workers design a novel self-complexation and complexation controlled target drug carrier for DOX delivery.

Self-complexation and complexation-controlled target cancer therapy
Li Li, Ming Zhao, Wenhao Li, Yuji Wang, Zhuge Zhang, Ran An and Shiqi Peng

Also in this issue:

A review from James C. Knight and Frank R. Wuest, from University of Alberta, that aims to provide a comprehensive overview of the application of CXCR4-targeted imaging probes across both nuclear (positron emission tomography/single-photon emission computed tomography) and optical modalities.

Nuclear (PET/SPECT) and optical imaging probes targeting the CXCR4 chemokine receptor

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Imaging probes targeting the CXCR4 chemokine receptor

Nuclear (PET/SPECT) and optical imaging probes targeting the CXCR4 chemokine receptor
James C. Knight and Frank R. Wuest

Chemokines are a family of small cytokines which are known to activate G protein-coupled receptors thereby inducing cellular migration. So far, approximately 50 chemokines and 20 chemokine receptors have been identified which collectively form the human chemokine system.

The chemokine receptor CXCR4 has been found to be highly expressed in a wide variety of cancer types. It has also been shown that these elevated expression levels are yet further increased upon metastasis. This means that this receptor is a highly attractive target which could facilitate the diagnostic imaging of many aggressive cancers.

In this review James C. Knight and Frank R. Wuest, from University of Alberta, aim to provide a comprehensive overview of the application of CXCR4-targeted imaging probes across both nuclear (positron emission tomography/single-photon emission computed tomography) and optical modalities, which includes a detailed analysis of the chemical aspects of probe design.

Read the full review here…

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Improved drugs to treat malarial liver infection

A Chemistry World story on a recent MedChemComm paper.

Antimalarial drugs with increased in vitro activity have been developed by scientists in Portugal and the US. These novel drugs, called primacins, are active against two stages of malarial infection and are more active against liver parasites than the current clinical use drug, primaquine.

Mosquito-borne malaria is a highly infectious and potentially fatal disease that affects millions of people every year. When humans are bitten by a malaria-infected mosquito, they undergo a clinically silent liver-stage infection when thousands of malaria parasites (merozoites) are released into the bloodstream. Drugs that are active against liver parasites are rare and currently, primaquine is the only drug in clinical use. However, its use is hampered by low oral bioavailability and high hemotoxicity, making it unsuitable for pregnant women, children and the elderly.

The new primacins, developed by Paula Gomes from the University of Porto, Portugal, and co-workers combine primaquine with cinnamic acids, which are also known for their antimalarial activity. ‘This ‘‘covalent bitherapy’’ involves linking two molecules with individual intrinsic activity into a single agent, thus packaging dual activity into a single hybrid molecule,’ explains Gomes. ‘So far, none of the antimalarials reported in the literature combine these two antimalarial pharmacophores. Moreover, the chemistry underlying their preparation is simple and cheap, which is our constant concern when dealing with development of antimalarials, as malaria is mainly endemic to low income countries.’

Larry Walker, a professor in pharmacology at the University of Mississippi, US, agrees that the work is promising, but says that further experiments and animal testing are necessary. ‘What is new here is the finding that, using this liver stage parasite culture model, which is fairly new and very useful, they can show improved potency of these derivatives. This is really the most important feature of this study,’ he says. ‘However, it is important to keep in perspective what still needs to be done to have a real advance for this drug class. What is needed is to show that it improves activity in animal models; and more importantly, shows reduced hematological toxicity compared to primaquine.’

Gomes agrees that in vivo tests are the way forward: ‘The next step consists of establishing how active our compounds are in vivo, how are they absorbed, distributed, metabolised and eliminated,’ she says. ‘If the compounds are confirmed to be highly active in vivo, we’ll then step forward into the so-called pre-clinical assays.’

REFERENCES

1. Chemistry World story by Emma Eley

2. B Pérez et al, MedChemComm, 2012, DOI: 10.1039/c2md20113e

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